Structure

    redEnd--??1D-GalNAc,p(--3?1D-Gal,p)--6b1D-GlcNAc,p--??1S$MONO,Und,-H,0,redEnd

An E-workflow for implementing guidelines in glycomics mass spectrometry

possibly a core 8 since Gala1

GlyTouCan Accession Number: Loading...

Peak Intensity
204.94 2.6
262.85 3.3
282.08 28.8

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--??1S$MONO,Und,-H,0,redEnd
282.32 7.2

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--??1S$MONO,Und,-H,0,redEnd
283.11 4.4
341.71 4.5

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--??1S$MONO,Und,-H,0,redEnd
341.95 3.8

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--??1S$MONO,Und,-H,0,redEnd
361.21 2.8
406.97 7.8

Annotations:

Z redEnd--??1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1S/#lcleavage$MONO,Und,-H,0,redEnd
424.97 2.0

Annotations:

Y redEnd--??1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1S/#lcleavage$MONO,Und,-H,0,redEnd
425.35 3.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1S/#lcleavage$MONO,Und,-H,0,redEnd
426.19 3.9
445.9 2.0
457.25 1.6
466.33 4.7
469.56 2.0
487.09 8.4

Annotations:

Z redEnd--??1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1S$MONO,Und,-H,0,redEnd
490.86 2.6
505.13 315.9

Annotations:

Y redEnd--??1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1S$MONO,Und,-H,0,redEnd
506.21 60.5
546.18 3.9
605.99 8.2
607.03 3.5

Annotations:

^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--3?1D-Gal,p/#xcleavage_0_4)--6b1D-GlcNAc,p--??1S$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--3?1D-Gal,p/#xcleavage_1_3)--6b1D-GlcNAc,p--??1S$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--3?1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--??1S$MONO,Und,-H,0,redEnd
625.09 3.3
711.17 3.6

There are 9 similar spectra:

Id Structure Score

3111

1.00

6650

1.00

3491

1.00

7648

1.00

7664

1.00

6705

1.00

5388

0.96

7877

0.87

4260

0.57

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 666.19
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Bos Taurus
Tissue - Cervix Mucus

HPLC

Column NA

Method

  • 78 min gradient with Approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

Report errors in this entry

UniCarb-DR Creative Commons License

Supported by SIB ExPASy  |  JST / NBDCDICP