Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd

An E-workflow for implementing guidelines in glycomics mass spectrometry

GlyTouCan Accession Number: Loading...

Peak Intensity
203.62 0.6

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
204.11 1.0

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
205.01 6.9

Annotations:

^{1,3}A_{Gal} b1D-Gal,p/#acleavage_1_3--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
205.32 0.9

Annotations:

^{1,3}A_{Gal} b1D-Gal,p/#acleavage_1_3--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
220.19 2.9

Annotations:

C ?1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
233.1 0.6

Annotations:

B^{0,3}X_{Fuc} ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_3$MONO,Und,-H,0,redEnd
247.12 1.5

Annotations:

B^{1,3}X_{Fuc} ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd B^{2,4}X_{Fuc} ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
248.03 0.9
257.12 0.4
261.91 1.7

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd ^{1,3}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_1_3--3b1D-Gal,p--2a1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd
262.15 3.4

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd ^{1,3}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_1_3--3b1D-Gal,p--2a1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd
264.09 1.1
265.13 0.5

Annotations:

C^{1,3}X_{Fuc} ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd C^{2,4}X_{Fuc} ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
276.17 4.5

Annotations:

^{1,4}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_4)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{3,5}A_{GalNAc} ?1D-GalNAc,p/#acleavage_3_5--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd Z^{1,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_1_4$MONO,Und,-H,0,redEnd
277.23 1.7
281.1 0.7

Annotations:

C^{0,4}X_{Fuc} ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd
287.25 0.4

Annotations:

Z^{0,2}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
288.03 0.6
290.11 0.6
290.89 1.0
294.86 0.6
299.12 0.4
306.19 1.0

Annotations:

^{1,3}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_3)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd Z^{1,3}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd
306.84 0.6

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
307.25 0.5

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
308.28 0.3
312.37 0.4
324.39 0.5

Annotations:

^{1,3}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_3)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y^{1,3}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd
324.83 0.9

Annotations:

C ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
325.46 0.4

Annotations:

C ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
325.84 0.5
328.97 1.9
329.22 2.1
340.84 1.3
347.18 4.5

Annotations:

Z^{0,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Z^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
347.48 1.1

Annotations:

Z^{0,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Z^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
348.25 2.7

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
353.27 1.1
357.32 0.7
359.1 2.3
359.55 1.5
359.88 0.5
365.05 5.7

Annotations:

Y^{0,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Y^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
365.36 2.9

Annotations:

Y^{0,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Y^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
365.73 0.5

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
366.06 1.6

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
371.31 0.4
372.13 0.5
379.24 1.6
382.09 0.6
389.12 11.0
390.18 2.6
392.01 0.5
407.16 886.8

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
408.15 120.5

Annotations:

^{1,3}A_{GalNAc} ?1D-GalNAc,p/#acleavage_1_3--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd ^{0,2}X_{Fuc}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_2)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
422.12 6.0

Annotations:

^{1,4}X_{Fuc}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_1_4)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
425.19 11.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
426.15 3.5

Annotations:

^{0,2}X_{Fuc}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_2)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
440.24 1.9

Annotations:

^{1,4}X_{Fuc}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_1_4)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
476.04 0.4
509.17 1.7

Annotations:

Z^{0,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Z^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
512.29 12.0

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
512.74 0.7

Annotations:

Y^{3,5}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_3_5$MONO,Und,-H,0,redEnd
513.3 2.9

Annotations:

Y^{3,5}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_3_5$MONO,Und,-H,0,redEnd
513.6 0.6

Annotations:

Y^{3,5}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_3_5$MONO,Und,-H,0,redEnd
530.19 2.3

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
530.84 0.6
531.21 3.9
552.16 1.1
554.76 1.4
569.13 5.1

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
569.34 4.1

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
570.34 0.8
582.79 0.7
583.34 0.7
583.65 0.8
587.2 0.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
588.26 0.8
609.09 0.5
631.44 0.4
636.92 0.3
653.27 1.9
655.13 0.5
656.01 0.9
673.23 33.1

Annotations:

^{0,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd ^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{1,3}X_{Fuc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_1_3)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd ^{2,4}X_{Fuc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_4)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
674.22 11.0
690.51 0.5
691.35 10.3
691.65 1.6
692.31 2.9
697.84 1.0
699.03 1.0
701.58 1.4
703.02 1.0
704.35 0.3
715.01 0.6

There are 13 similar spectra:

Id Structure Score

1.00

5559

1.00

4236

0.99

5228

0.99

6718

0.99

5777

0.99

3876

0.99

5515

0.96

7881

0.85

3873

0.59

3753

0.54

5556

0.52

5774

0.51

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 732.30
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Bos Taurus
Tissue - Cervix Mucus

HPLC

Column NA

Method

  • 78 min gradient with Approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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