Structure

    redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd

An E-workflow for implementing guidelines in glycomics mass spectrometry

GlyTouCan Accession Number: Loading...

Peak Intensity
324.37 0.4

Annotations:

Y^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#ycleavage)--3b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Y^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#ycleavage)--3b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd Y^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#ycleavage)--3b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
360.07 0.4
384.1 0.5

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#ycleavage)--3b1D-Gal,p$MONO,Und,-H,0,redEnd
384.36 1.0

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#ycleavage)--3b1D-Gal,p$MONO,Und,-H,0,redEnd
389.11 0.5
479.17 1.0
490.14 1.2
492.31 0.4

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#zcleavage)--?a1L-Fuc,p$MONO,Und,-H,0,redEnd
521.07 0.5
551.11 2.5

Annotations:

ZZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#zcleavage)--?a1L-Fuc,p/#zcleavage)--3b1D-Gal,p$MONO,Und,-H,0,redEnd
553.33 1.1

Annotations:

ZY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#zcleavage)--?a1L-Fuc,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
571.31 0.7

Annotations:

YY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
654.2 0.7
672.1 0.6

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p$MONO,Und,-H,0,redEnd
673.42 0.4

Annotations:

Y^{1,3}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#ycleavage)--?a1L-Fuc,p/#xcleavage_1_3)--3b1D-Gal,p$MONO,Und,-H,0,redEnd Y^{2,4}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#ycleavage)--?a1L-Fuc,p/#xcleavage_2_4)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#xcleavage_1_3)--?a1L-Fuc,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#xcleavage_2_4)--?a1L-Fuc,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Y^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd Y^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
733.2 4.2

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
733.4 1.9

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
734.26 2.8
834.85 0.4

Annotations:

^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#xcleavage_1_3)--?a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#xcleavage_2_4)--?a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{0,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#xcleavage_0_4)--?a1L-Fuc,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#xcleavage_1_3)--?a1L-Fuc,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#xcleavage_2_4)--?a1L-Fuc,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{1,3}X_{Fuc}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p/#xcleavage_1_3)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Fuc}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p/#xcleavage_2_4)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y^{1,3}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#ycleavage)--?a1L-Fuc,p/#xcleavage_1_3)--3b1D-Gal,p$MONO,Und,-H,0,redEnd Y^{2,4}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#ycleavage)--?a1L-Fuc,p/#xcleavage_2_4)--3b1D-Gal,p$MONO,Und,-H,0,redEnd Y^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Y^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd Y^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
835.26 1.1

Annotations:

^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#xcleavage_1_3)--?a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p/#xcleavage_2_4)--?a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{0,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#xcleavage_0_4)--?a1L-Fuc,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#xcleavage_1_3)--?a1L-Fuc,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#xcleavage_2_4)--?a1L-Fuc,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{1,3}X_{Fuc}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p/#xcleavage_1_3)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Fuc}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p/#xcleavage_2_4)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y^{1,3}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#ycleavage)--?a1L-Fuc,p/#xcleavage_1_3)--3b1D-Gal,p$MONO,Und,-H,0,redEnd Y^{2,4}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#ycleavage)--?a1L-Fuc,p/#xcleavage_2_4)--3b1D-Gal,p$MONO,Und,-H,0,redEnd Y^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Y^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd Y^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
845.77 1.5

Annotations:

^{1,5}A_{GalNAc}Z ?1D-GalNAc,p/#acleavage_1_5(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p/#zcleavage)--3b1D-Gal,p$MONO,Und,-H,0,redEnd
859.11 1.5
876.12 0.7
877.23 3.1

Annotations:

Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#zcleavage)--?a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
877.85 0.5
893.22 1.3

Annotations:

Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p/#zcleavage)--3b1D-Gal,p$MONO,Und,-H,0,redEnd
895.3 3.3

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#ycleavage)--?a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
896.23 1.2
897.75 0.9
910.68 0.4
912.48 0.5
920.33 1.1
966.37 0.7
967.8 1.1

Annotations:

^{0,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#xcleavage_0_3)--?a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{1,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#xcleavage_1_4)--?a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{1,4}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p/#xcleavage_1_4)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{0,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_0_3$MONO,Und,-H,0,redEnd ^{1,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_1_4$MONO,Und,-H,0,redEnd
979.75 1.6
982.78 1.5
983.57 1.5

Annotations:

^{3,5}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#xcleavage_3_5)--?a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{0,3}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p/#xcleavage_0_3)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{3,5}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_3_5$MONO,Und,-H,0,redEnd
993.68 1.4
994.73 1.2
995.03 0.7
996.67 0.8
997.27 4.3

Annotations:

^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#xcleavage_0_4)--?a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#xcleavage_1_3)--?a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p/#xcleavage_2_4)--?a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{1,3}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p/#xcleavage_1_3)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,4}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p/#xcleavage_2_4)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--?b1D-Gal,p--3a1D-Gal,p)--?a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
998.22 3.1
1004.1 2.1
1011.64 1.4
1012.1 2.6
1015.14 0.6
1020.01 0.5

There are 2 similar spectra:

Id Structure Score

0.78

7634

0.56

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1056.40
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Bos Taurus
Tissue - Cervix Mucus

HPLC

Column NA

Method

  • 78 min gradient with Approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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