Structure

    redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p)--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd

An E-workflow for implementing guidelines in glycomics mass spectrometry

GlyTouCan Accession Number: Loading...

Peak Intensity
305.98 3.8
308.0 2.5

Annotations:

C^{3,5}X_{HexNAc} ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--??1HexNAc,p/#xcleavage_3_5$MONO,Und,-H,0,redEnd
347.85 5.4

Annotations:

ZZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#zcleavage)--3b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
364.3 1.8

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
384.1 1.4

Annotations:

YY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
389.24 11.5

Annotations:

ZZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
390.01 3.8
392.05 2.5

Annotations:

B^{1,5}X_{Gal} ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_1_5$MONO,Und,-H,0,redEnd
407.13 14.4

Annotations:

ZY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
407.51 8.2

Annotations:

ZY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
422.06 1.9

Annotations:

B^{2,5}X_{Gal} ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_2_5$MONO,Und,-H,0,redEnd
425.3 2.7

Annotations:

YY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
425.85 4.1
442.95 1.9

Annotations:

^{0,2}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_0_2--4b1D-Gal,p--3a1D-Gal,p$MONO,Und,-H,0,redEnd
452.4 3.5

Annotations:

B^{3,5}X_{Gal} ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_3_5$MONO,Und,-H,0,redEnd
462.32 2.2
470.08 1.9

Annotations:

C^{3,5}X_{Gal} ?1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_3_5$MONO,Und,-H,0,redEnd
508.94 2.2

Annotations:

Z^{0,4}X_{HexNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#zcleavage)--3b1D-Gal,p--??1HexNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Z^{2,4}X_{HexNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#zcleavage)--3b1D-Gal,p--??1HexNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{2,4}X_{GlcNAc}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#xcleavage_2_4)--3b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_3)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_2_4)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
510.17 2.1
526.22 9.4

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p$MONO,Und,-H,0,redEnd
527.25 10.3

Annotations:

Y^{0,4}X_{HexNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Y^{2,4}X_{HexNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{2,4}X_{GlcNAc}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#xcleavage_2_4)--3b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_3)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_2_4)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
533.27 3.2
545.09 2.1
550.56 1.5
551.23 1.9

Annotations:

ZZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage)--3b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#zcleavage)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
569.18 57.3

Annotations:

Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#zcleavage)--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
571.36 2.5
585.67 1.8
586.05 2.7

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p$MONO,Und,-H,0,redEnd
587.18 4.7

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#ycleavage)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
588.23 1.6
594.09 1.8
611.02 1.8

Annotations:

^{0,2}X_{Gal}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_0_2)--3b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{0,2}X_{Gal}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_0_2)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
629.22 2.2

Annotations:

^{0,2}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_0_2)--3b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{0,2}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_0_2)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
655.28 3.9
662.19 1.6
671.03 3.4

Annotations:

Z^{1,3}X_{HexNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage)--3b1D-Gal,p--??1HexNAc,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd ^{2,5}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_2_5(--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_3)--3b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_2_4)--3b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{0,4}X_{Gal}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_0_4)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_1_3)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_2_4)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
673.2 3.2
674.24 4.0
677.36 1.6
683.15 3.3
689.16 11.7

Annotations:

Y^{1,3}X_{HexNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_3)--3b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_2_4)--3b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{0,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_0_4)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_1_3)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#xcleavage_2_4)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
690.18 9.7
692.44 2.9
707.16 3.6
713.18 11.3

Annotations:

ZZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#zcleavage)--3b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
715.38 9.0
715.94 5.2

Annotations:

^{3,5}X_{GlcNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#xcleavage_3_5)--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd Y^{3,5}X_{HexNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p/#xcleavage_3_5$MONO,Und,-H,0,redEnd
716.23 5.4

Annotations:

^{3,5}X_{GlcNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#xcleavage_3_5)--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd Y^{3,5}X_{HexNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p/#xcleavage_3_5$MONO,Und,-H,0,redEnd
727.29 6.4
731.42 93.2

Annotations:

Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
732.15 28.3
732.42 13.8
733.22 7.2
734.28 2.5
749.11 35.7

Annotations:

YY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
749.33 15.9

Annotations:

YY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
749.61 3.0

Annotations:

YY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
750.28 14.6
789.86 2.6

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
793.23 5.1
842.05 5.9
850.05 2.3
872.43 2.5
878.0 4.6

Annotations:

Y^{3,5}X_{HexNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p/#xcleavage_3_5$MONO,Und,-H,0,redEnd
879.6 4.6
881.68 2.1
892.78 1.1

Annotations:

^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_3)--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_2_4)--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd Y^{0,4}X_{HexNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Y^{2,4}X_{HexNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
893.28 6.1

Annotations:

Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p)--3b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
893.89 2.2
894.36 6.9
895.29 2.3
896.13 5.4
903.03 4.7
903.85 2.1

Annotations:

^{1,5}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_1_5(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p/#ycleavage)--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
911.06 15.5

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--3a1D-Gal,p)--3b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
912.03 1.9
912.64 7.4
917.49 5.6
943.9 1.8
945.25 1.4
952.97 2.6
953.78 1.4
955.07 3.1
962.32 32.1
963.25 30.9
964.4 2.5
974.7 4.2
976.86 2.8
978.32 1.8
982.49 4.0
993.25 1.8
997.1 17.2
998.32 2.9
1012.11 1.6
1012.54 1.6
1014.03 6.5
1014.22 2.1
1015.32 29.9
1016.41 8.0
1022.04 2.7
1025.76 3.5

There are 1 similar spectra:

Id Structure Score

0.86

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1113.42
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Bos Taurus
Tissue - Cervix Mucus

HPLC

Column NA

Method

  • 78 min gradient with Approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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