Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--4b1D-Gal,p--3a2D-NeuAc,p)--6?1S$MONO,Und,-H,0,redEnd

An E-workflow for implementing guidelines in glycomics mass spectrometry

GlyTouCan Accession Number: Loading...

Peak Intensity
606.08 2.4

Annotations:

^{3,5}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_3_5(--4b1D-Gal,p--3a2D-NeuAc,p)--6?1S$MONO,Und,-H,0,redEnd
667.95 3.9
714.16 3.9
804.87 2.9
828.13 12.5
828.34 4.6
829.16 822.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--4b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6?1S$MONO,Und,-H,0,redEnd
830.39 9.5
831.27 2.8
883.32 6.4
904.28 3.4
957.71 3.1
959.67 2.9
965.32 7.7
965.8 3.3
1040.32 11.7

Annotations:

redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--4b1D-Gal,p--3a2D-NeuAc,p)--6?1S/#lcleavage$MONO,Und,-H,0,redEnd
1057.43 69.6
1060.15 4.0

Annotations:

^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_0_4)--6b1D-GlcNAc,p(--4b1D-Gal,p--3a2D-NeuAc,p)--6?1S$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_3)--6b1D-GlcNAc,p(--4b1D-Gal,p--3a2D-NeuAc,p)--6?1S$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p(--4b1D-Gal,p--3a2D-NeuAc,p)--6?1S$MONO,Und,-H,0,redEnd
1076.17 17.3

Annotations:

^{1,3}X_{NeuAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--4b1D-Gal,p--3a2D-NeuAc,p/#xcleavage_1_3)--6?1S$MONO,Und,-H,0,redEnd
1076.46 7.4

Annotations:

^{1,3}X_{NeuAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--4b1D-Gal,p--3a2D-NeuAc,p/#xcleavage_1_3)--6?1S$MONO,Und,-H,0,redEnd

There are 10 similar spectra:

Id Structure Score

4272

1.00

3514

1.00

5403

1.00

5402

1.00

3513

0.99

4086

0.99

6688

0.98

5816

0.98

6684

0.97

7222

0.90

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1119.34
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Bos Taurus
Tissue - Cervix Mucus

HPLC

Column NA

Method

  • 78 min gradient with Approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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