Structure

    redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuGc,p$MONO,Und,-2H,0,redEnd

An E-workflow for implementing guidelines in glycomics mass spectrometry

GlyTouCan Accession Number: Loading...

Peak Intensity
195.89 3.8

Annotations:

B^{1,5}X_{Gal} ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_5$MONO,Und,-2H,0,redEnd
281.87 2.6

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--6?1S$MONO,Und,-H,0,redEnd
306.17 24.2

Annotations:

B b1D-Gal,p/#bcleavage--3a2D-NeuGc,p$MONO,Und,-H,0,redEnd
307.06 4.6

Annotations:

C^{0,2}X_{NeuGc} ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuGc,p/#xcleavage_0_2$MONO,Und,-2H,0,redEnd Y^{1,5}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#ycleavage)--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_5$MONO,Und,-2H,0,redEnd ^{1,5}X_{GlcNAc}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#xcleavage_1_5)--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-2H,0,redEnd ^{1,5}X_{GlcNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S/#lcleavage)--3b1D-Gal,p--3b1D-GlcNAc,p/#xcleavage_1_5$MONO,Und,-2H,0,redEnd
387.32 4.4

Annotations:

^{2,5}A_{Gal} b1D-Gal,p/#acleavage_2_5--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuGc,p$MONO,Und,-2H,0,redEnd
435.14 3.5
436.09 4.3

Annotations:

B^{1,5}X_{NeuGc} b1D-Gal,p/#bcleavage--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuGc,p/#xcleavage_1_5$MONO,Und,-H,0,redEnd B^{1,4}X_{Gal} ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_4$MONO,Und,-H,0,redEnd ^{1,4}A_{Gal}Z b1D-Gal,p/#acleavage_1_4--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuGc,p/#zcleavage$MONO,Und,-H,0,redEnd
468.83 4.1

Annotations:

Y^{2,4}X_{NeuGc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#ycleavage)--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuGc,p/#xcleavage_2_4$MONO,Und,-2H,0,redEnd
483.01 4.0

Annotations:

^{1,5}A_{GalNAc}Z ?1D-GalNAc,p/#acleavage_1_5(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuGc,p/#zcleavage$MONO,Und,-2H,0,redEnd Y^{2,5}X_{GlcNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#ycleavage)--3b1D-Gal,p--3b1D-GlcNAc,p/#xcleavage_2_5$MONO,Und,-H,0,redEnd ^{2,5}X_{GlcNAc}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#xcleavage_2_5)--3b1D-Gal,p--3b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,5}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S/#lcleavage)--3b1D-Gal,p/#xcleavage_2_5$MONO,Und,-H,0,redEnd
486.08 1.2

Annotations:

C b1D-GlcNAc,p/#ccleavage--4b1D-Gal,p--3a2D-NeuGc,p$MONO,Und,-H,0,redEnd
486.77 4.4

Annotations:

Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
487.29 6.8

Annotations:

Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
505.01 2.3

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
506.27 5.5

Annotations:

Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuGc,p/#zcleavage$MONO,Und,-2H,0,redEnd
506.89 6.4

Annotations:

Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuGc,p/#zcleavage$MONO,Und,-2H,0,redEnd
523.01 6.1
539.34 4.2

Annotations:

^{1,5}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_1_5(--6b1D-GlcNAc,p--6?1S/#lcleavage)--3b1D-Gal,p--3b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
549.17 2.8
605.97 4.0
609.2 2.6

Annotations:

^{0,4}X_{NeuGc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuGc,p/#xcleavage_0_4$MONO,Und,-2H,0,redEnd ^{1,3}A_{GalNAc}Z ?1D-GalNAc,p/#acleavage_1_3--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuGc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{2,5}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_5(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuGc,p$MONO,Und,-2H,0,redEnd
625.42 9.1
637.71 5.3
638.23 10.9
642.36 6.6

Annotations:

B^{3,5}X_{NeuGc} ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuGc,p/#xcleavage_3_5$MONO,Und,-H,0,redEnd
850.3 12.4
852.44 9.0

Annotations:

Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
870.1 1.6

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
980.1 1.7
1032.23 276.7

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuGc,p/#ycleavage$MONO,Und,-H,0,redEnd
1032.79 24.6

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuGc,p/#ycleavage$MONO,Und,-H,0,redEnd
1033.2 178.5
1034.16 70.3
1035.21 13.1
1035.52 5.4
1086.53 3.8

There are 3 similar spectra:

Id Structure Score

3169

0.97

0.95

0.82

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1338.42
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Bos Taurus
Tissue - Cervix Mucus

HPLC

Column NA

Method

  • 78 min gradient with Approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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