Structure

    redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd

An E-workflow for implementing guidelines in glycomics mass spectrometry

GlyTouCan Accession Number: Loading...

Peak Intensity
786.2 1.0
910.69 0.5

Annotations:

B^{1,3}X_{NeuGc} ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p/#xcleavage_1_3)--6?1S$MONO,Und,-H,0,redEnd
974.7 0.5

Annotations:

YY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p/#ycleavage)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
975.43 1.1

Annotations:

YY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p/#ycleavage)--3a2D-NeuGc,p/#ycleavage)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
976.64 0.6

Annotations:

Z^{0,2}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p/#zcleavage)--6?1S/#lcleavage)--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd ^{2,5}X_{GalNAc}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p/#xcleavage_2_5)--3a2D-NeuGc,p/#zcleavage)--6?1S/#lcleavage)--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
1033.12 0.5
1098.36 0.9

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p/#ycleavage)--6?1S/#lcleavage)--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
1116.58 0.8

Annotations:

Z^{0,4}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p/#zcleavage)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd
1149.49 0.8
1176.37 13.3

Annotations:

Z^{2,5}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p/#zcleavage)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_5$MONO,Und,-H,0,redEnd
1177.22 13.7

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
1178.25 803.8

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p/#ycleavage)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
1179.32 79.2

Annotations:

^{0,2}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_0_2(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p/#ycleavage)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
1180.15 0.8
1194.19 0.7

Annotations:

Y^{2,5}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p/#ycleavage)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_5$MONO,Und,-H,0,redEnd
1194.56 1.1

Annotations:

Y^{2,5}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p/#ycleavage)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_5$MONO,Und,-H,0,redEnd
1255.7 1.1
1296.53 3.1
1300.82 1.3
1329.67 4.4
1330.28 2.4
1330.93 1.4
1390.29 1.8
1392.69 1.6
1403.51 0.5
1405.32 0.6

Annotations:

redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p)--6?1S/#lcleavage)--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
1405.61 6.7

Annotations:

redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p)--6?1S/#lcleavage)--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
1409.38 0.7
1411.12 2.0

Annotations:

^{3,5}X_{GalNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p/#xcleavage_3_5)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd ^{0,3}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_3$MONO,Und,-H,0,redEnd
1413.89 0.5
1420.04 1.5
1421.22 1.8
1422.28 5.1
1422.7 1.2
1425.34 1.8

Annotations:

^{1,3}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd ^{2,4}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p/#xcleavage_0_4)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd ^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p/#xcleavage_2_4)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
1434.47 1.0
1437.39 2.7

Annotations:

^{1,5}A_{GalNAc} ?1D-GalNAc,p/#acleavage_1_5(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
1440.32 0.9
1441.1 18.5

Annotations:

^{1,3}X_{NeuGc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p/#xcleavage_1_3)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd ^{0,4}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd
1441.47 10.1

Annotations:

^{1,3}X_{NeuGc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p/#xcleavage_1_3)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd ^{0,4}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p(--4b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p)--6?1S)--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd
1442.32 3.7
1444.4 0.8
1446.01 1.5

There are 1 similar spectra:

Id Structure Score

1.00

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1484.48
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Bos Taurus
Tissue - Cervix Mucus

HPLC

Column NA

Method

  • 78 min gradient with Approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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