Structure

    redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p$MONO,Und,-2H,0,redEnd

An E-workflow for implementing guidelines in glycomics mass spectrometry

GlyTouCan Accession Number: Loading...

Peak Intensity
178.84 2.5
204.18 5.4

Annotations:

ZY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#zcleavage)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#ycleavage)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
218.1 1.8
265.22 1.6
300.16 3.1

Annotations:

C ?1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p--6?1S$MONO,Und,-H,0,redEnd
306.19 17.2

Annotations:

B b1D-Gal,p/#bcleavage--3a2D-NeuGc,p$MONO,Und,-H,0,redEnd
307.03 2.4

Annotations:

C^{3,5}X_{GalNAc} ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p(--4b1D-GalNAc,p/#xcleavage_3_5)--3a2D-NeuGc,p$MONO,Und,-2H,0,redEnd ^{1,5}X_{GlcNAc}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#xcleavage_1_5)--3b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p/#ycleavage$MONO,Und,-2H,0,redEnd ^{1,5}X_{GalNAc}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S/#lcleavage)--3b1D-Gal,p(--4b1D-GalNAc,p/#xcleavage_1_5)--3a2D-NeuGc,p/#ycleavage$MONO,Und,-2H,0,redEnd
407.19 43.4

Annotations:

Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S/#lcleavage)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
408.15 10.2
435.08 6.9

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p/#ycleavage$MONO,Und,-2H,0,redEnd
450.85 4.2
469.51 2.6

Annotations:

^{0,2}X_{NeuGc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p/#xcleavage_0_2$MONO,Und,-2H,0,redEnd
479.23 2.0
486.74 7.6

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p/#ycleavage)--3a2D-NeuGc,p$MONO,Und,-2H,0,redEnd Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
487.05 8.0

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p/#ycleavage)--3a2D-NeuGc,p$MONO,Und,-2H,0,redEnd Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
527.83 5.2

Annotations:

^{0,2}X_{GalNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p/#xcleavage_0_2)--3a2D-NeuGc,p$MONO,Und,-2H,0,redEnd ^{0,4}X_{NeuGc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p/#xcleavage_0_4$MONO,Und,-2H,0,redEnd ^{2,4}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_2_4--3b1D-Gal,p(--4b1D-GalNAc,p/#ycleavage)--3a2D-NeuGc,p$MONO,Und,-H,0,redEnd
528.25 3.6

Annotations:

^{0,2}X_{GalNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p/#xcleavage_0_2)--3a2D-NeuGc,p$MONO,Und,-2H,0,redEnd ^{0,4}X_{NeuGc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p/#xcleavage_0_4$MONO,Und,-2H,0,redEnd ^{2,4}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_2_4--3b1D-Gal,p(--4b1D-GalNAc,p/#ycleavage)--3a2D-NeuGc,p$MONO,Und,-H,0,redEnd ^{2,5}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_5(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p$MONO,Und,-2H,0,redEnd
530.23 5.6
562.77 3.5

Annotations:

^{2,5}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p/#xcleavage_2_5$MONO,Und,-H,0,redEnd
649.13 7.2

Annotations:

ZY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p/#zcleavage)--3a2D-NeuGc,p/#ycleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p/#ycleavage)--3a2D-NeuGc,p/#zcleavage$MONO,Und,-H,0,redEnd
667.06 3.0

Annotations:

YY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p/#ycleavage)--3a2D-NeuGc,p/#ycleavage$MONO,Und,-H,0,redEnd
668.21 6.7

Annotations:

^{2,5}X_{GlcNAc}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#xcleavage_2_5)--3b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{2,5}X_{GalNAc}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S/#lcleavage)--3b1D-Gal,p(--4b1D-GalNAc,p/#xcleavage_2_5)--3a2D-NeuGc,p/#zcleavage$MONO,Und,-H,0,redEnd
668.43 2.3

Annotations:

^{2,5}X_{GlcNAc}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#xcleavage_2_5)--3b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{2,5}X_{GalNAc}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S/#lcleavage)--3b1D-Gal,p(--4b1D-GalNAc,p/#xcleavage_2_5)--3a2D-NeuGc,p/#zcleavage$MONO,Und,-H,0,redEnd
693.05 4.6
693.46 7.8
770.35 3.1
868.29 5.9
870.36 53.9

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p)--3a2D-NeuGc,p/#ycleavage$MONO,Und,-H,0,redEnd
871.19 33.5

Annotations:

^{0,2}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_0_2(--6b1D-GlcNAc,p--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p/#ycleavage)--3a2D-NeuGc,p$MONO,Und,-H,0,redEnd
872.37 10.0
872.99 4.1

Annotations:

^{1,3}X_{GlcNAc}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#xcleavage_1_3--6?1S)--3b1D-Gal,p(--4b1D-GalNAc,p/#ycleavage)--3a2D-NeuGc,p$MONO,Und,-H,0,redEnd
1059.32 4.4

There are 1 similar spectra:

Id Structure Score

0.97

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1176.36
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Bos Taurus
Tissue - Cervix Mucus

HPLC

Column NA

Method

  • 78 min gradient with Approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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