Structure

    redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
364.0 0.4

Annotations:

B a1D-GalNAc,p/#bcleavage--3?1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd B a1D-GalNAc,p/#bcleavage--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
387.02 0.7
387.28 0.6
388.16 0.8
388.71 0.0
396.27 0.6
405.06 1.3
405.61 0.0
406.97 0.5

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
424.15 12.4

Annotations:

^{0,4}A_{GalNAc} a1D-GalNAc,p/#acleavage_0_4--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,4}A_{GalNAc} a1D-GalNAc,p/#acleavage_2_4--3?1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
425.13 0.7

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
465.99 0.8
466.53 0.0
485.35 0.7
549.24 0.6

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
549.91 0.2
567.26 1.1

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
567.93 1.2
568.54 0.0
569.29 0.3

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
569.98 1.2
570.34 0.9
570.88 0.0
587.24 0.2

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
592.16 0.4

Annotations:

ZZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
592.98 0.4
603.24 0.3
628.25 0.4

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
670.93 0.5
706.88 0.3
707.15 0.6
707.7 0.0
728.29 0.4
730.15 3.6

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_0_4--3?1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd ^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
731.08 1.8
731.69 0.0
748.32 1.7
749.28 3.5
749.79 0.5
753.96 0.3

Annotations:

ZZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
772.13 0.9

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
772.48 0.7
773.29 0.7
790.16 0.6

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
790.44 0.4
819.31 0.4
844.22 0.4
850.22 0.7
850.78 0.0
868.26 0.6
874.47 0.4
885.17 0.9
885.71 0.0
892.17 2.9

Annotations:

Y^{2,4}X_{Gal} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
892.42 1.1
893.0 0.0
893.38 0.8
893.94 0.0
910.44 0.6
916.17 2.6
916.74 0.0
931.97 0.6

Annotations:

B ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
932.68 0.4
933.06 0.9

Annotations:

^{2,4}X_{HexNAc}Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#xcleavage_2_4)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
933.38 0.4
934.03 0.4

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
952.38 6.6

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
952.92 0.8
953.27 1.5
953.88 0.0
954.66 0.4
958.38 0.3
975.28 3.2

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
975.65 0.3
976.23 1.0
976.78 0.0
993.05 0.8

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
993.61 0.0
1035.43 2.2

Annotations:

^{0,2}X_{Gal} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p)--6?1HexNAc,p--??1D-Gal,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd ^{0,2}X_{HexNAc} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#xcleavage_0_2)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
1036.04 0.0
1047.21 0.8
1047.48 0.4
1048.07 0.9
1048.62 0.0
1053.29 1.2
1053.86 0.0
1077.49 0.5
1095.36 20.9
1096.38 6.7
1097.01 0.0
1110.3 0.5
1112.98 1.6
1113.21 2.3
1113.8 0.0
1114.38 2.2
1114.95 0.0
1155.79 0.4
1156.3 1.1
1156.75 1.8
1157.33 0.0

There are 3 similar spectra:

Id Structure Score

1.00

8036

0.70

8038

0.55

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1154.45
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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