Structure

    redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p)--6b1D-GlcNAc,p$MONO,Und,-2H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
345.66 0.3
346.08 1.5

Annotations:

BZ a1D-GalNAc,p/#bcleavage--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
346.71 0.0
347.9 1.4
348.26 1.8

Annotations:

B ?1HexNAc,p/#bcleavage--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
348.83 0.0
351.86 0.3
354.87 0.6
364.12 3.4

Annotations:

BY a1D-GalNAc,p/#bcleavage--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ a1D-GalNAc,p/#ccleavage--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
364.7 0.0
365.01 0.3

Annotations:

C a1D-GalNAc,p/#ccleavage--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-2H,0,redEnd
377.94 0.2
379.24 1.0
379.79 0.0
382.2 0.4

Annotations:

CY a1D-GalNAc,p/#ccleavage--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
398.92 0.3
404.97 0.8

Annotations:

BY ?1D-Gal,p/#bcleavage--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-Gal,p/#ccleavage--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
405.53 0.0
442.68 0.3
465.9 1.9
466.28 2.2

Annotations:

^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_0_4--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-2H,0,redEnd
466.85 0.0
475.46 0.6
480.77 2.0
481.33 0.0
487.13 0.8
487.68 1.2

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-2H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-2H,0,redEnd Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-2H,0,redEnd
488.28 0.0
490.13 2.0
490.67 0.0
496.18 56.6

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-2H,0,redEnd Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-2H,0,redEnd
496.71 20.5
497.42 0.0
499.07 0.6
511.28 0.4
534.73 4.7
535.17 1.8
535.76 0.8
543.65 3.9
544.37 0.0
544.84 2.2
545.39 0.0
554.08 0.3
564.69 20.4
565.2 1.6
565.46 1.2
566.03 0.0
568.75 0.8

Annotations:

C ?1D-Gal,p/#ccleavage--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-2H,0,redEnd YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
569.29 0.0

Annotations:

C ?1D-Gal,p/#ccleavage--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
578.78 0.5
581.37 0.5
588.68 7.1

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-2H,0,redEnd
588.92 2.7
589.24 1.8
589.85 0.0
607.98 0.5
609.63 0.5

Annotations:

^{2,4}A_{GalNAc}Z a1D-GalNAc,p/#acleavage_2_4--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
628.17 2.6

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
628.86 0.0
639.91 0.4
641.26 1.0
641.81 0.7
642.36 0.0
698.48 0.8
699.03 0.0
699.57 0.3
700.02 0.3
773.23 0.8

Annotations:

^{2,4}A_{GalNAc} a1D-GalNAc,p/#acleavage_2_4--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
773.78 0.0
790.17 0.4
790.53 0.8

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
844.14 0.7
844.69 0.0
915.59 0.5

Annotations:

^{0,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_0_4--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
933.2 1.0
933.61 2.2

Annotations:

^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_0_4--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd
934.25 1.3

Annotations:

CY ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
958.11 0.5
974.9 0.4
975.57 0.5

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
976.31 0.9
976.87 0.0
993.3 28.7

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
994.39 2.9
995.42 1.0
995.97 0.0
1028.12 0.6
1069.9 0.8
1070.45 0.0
1129.94 0.8
1130.47 0.8
1131.02 0.0
1178.13 0.6
1178.44 0.6
1178.69 1.4

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
1178.97 0.3
1179.28 0.4
1282.48 1.1
1283.17 0.9
1283.72 0.0

There are not related spectra

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1341.53
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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