Structure

    redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p)--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
306.04 56.4

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd
307.01 3.5
307.28 2.4
307.86 0.0
324.03 2.4

Annotations:

C ?1D-GalNAc,p/#ccleavage--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd
324.63 0.0
364.1 3.1

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
364.7 0.0
365.05 0.6
407.3 0.9

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuGc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuGc,p/#ycleavage$MONO,Und,-H,0,redEnd
408.0 0.9
416.92 4.4
417.2 1.0
435.12 4.9
435.35 2.1
435.94 0.0
452.91 0.7
479.16 2.4
479.71 0.0
492.76 0.8
493.22 2.2
493.4 1.0
493.96 0.0
509.22 1.4
509.78 0.0
511.12 3.1

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p/#zcleavage)--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd
511.78 0.0
526.84 1.2

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_0_4--3b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
527.39 0.0
529.22 1.4

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p/#ycleavage)--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd
529.77 0.0
531.26 1.2
531.8 0.0
569.04 2.1
569.27 2.3

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p)--6a2D-NeuGc,p/#zcleavage$MONO,Und,-H,0,redEnd
569.86 0.0
570.52 1.5
571.16 0.5
586.98 9.0

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p)--6a2D-NeuGc,p/#ycleavage$MONO,Und,-H,0,redEnd
587.3 7.0
588.17 1.9
588.72 0.0
598.34 1.3
598.88 0.0
620.21 4.8
620.69 1.3
621.28 1.2
621.84 0.0
629.75 2.3
630.3 0.0
638.27 0.8
639.2 3.7
639.79 0.0
645.08 0.4
657.16 16.2

Annotations:

^{0,2}X_{NeuGc} redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p)--6a2D-NeuGc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
657.39 5.2
658.18 3.5
658.56 0.6
671.0 0.4
675.13 1.3
675.69 0.0
681.34 1.9
681.89 0.0
692.46 0.8
696.47 1.8
697.03 0.0
698.2 0.6
710.29 3.9
710.89 0.0
712.94 0.8
714.41 1.0

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd
714.95 0.0
716.17 0.6
728.16 1.4
728.55 1.0
729.11 0.0
732.16 0.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd
733.08 0.8
733.62 0.0
769.03 1.2
776.33 1.5
782.09 2.1
782.7 0.0
783.1 0.9
787.33 0.8
796.0 0.6
799.53 1.2
800.24 93.2
801.3 29.5
802.12 0.0
816.15 4.1
816.77 0.0
818.26 2.7
818.85 0.0
819.31 0.7
834.07 5.6
834.33 1.5
834.92 0.0
895.33 1.9
895.88 0.0

There are 9 similar spectra:

Id Structure Score

5724

1.00

1.00

5725

0.96

4862

0.96

0.96

7410

0.91

7439

0.91

7411

0.86

7440

0.86

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 893.33
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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