Structure

    redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--??1D-Gal,p)--??1S)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
283.84 0.5
284.4 0.0
290.22 0.2

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
302.09 0.1
308.99 0.5
309.54 0.0
321.79 0.1
326.18 1.0
326.69 0.0
367.71 0.1
370.03 29.0
370.78 0.2
443.87 0.4

Annotations:

B ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--??1D-Gal,p)--??1S$MONO,Und,-H,0,redEnd
444.44 0.0
464.05 0.1
465.93 0.2
502.97 0.1
505.3 0.4

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--??1D-Gal,p/#ycleavage)--??1S)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
505.86 0.0
513.17 0.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
563.8 0.2
573.13 0.4
573.69 0.0
583.88 0.4
584.44 0.0
587.2 1.7

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--??1D-Gal,p)--??1S/#lcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
587.86 0.0
607.28 0.2

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p(--??1D-Gal,p)--??1S$MONO,Und,-H,0,redEnd
608.2 0.3
608.75 0.0
630.02 0.3
630.87 0.1
634.14 0.1
648.98 0.5

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--??1D-Gal,p)--??1S)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
649.53 0.0
664.09 0.3
665.31 0.3
666.22 2.1
667.15 319.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--??1D-Gal,p)--??1S)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
668.2 17.5
669.15 0.2
670.05 0.1
674.8 0.2
680.97 0.1
690.01 0.3
700.37 0.2
711.22 0.5
711.77 0.0
713.13 0.3
713.67 0.0
725.01 0.5
725.55 0.0
731.13 0.3
737.21 0.3

Annotations:

^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--??1D-Gal,p)--??1S)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
743.89 0.1
780.02 0.2
780.55 0.0
787.34 0.2
793.15 1.0
794.02 0.2
798.13 0.2
800.08 0.1
802.29 0.2
804.21 0.2
809.09 0.1
841.45 0.1
841.97 0.1
855.26 0.1
856.74 0.1
860.21 1.8
860.81 0.0
861.27 0.1
866.27 0.1
869.08 0.2
875.74 0.2
876.28 0.4
876.7 0.7
877.45 0.8
878.22 61.3

Annotations:

redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--??1D-Gal,p)--??1S/#lcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
879.29 4.4
879.74 0.4
880.27 0.0
884.11 0.2
891.67 0.1
896.07 0.4
896.62 0.0
898.07 1.2
898.83 0.1
899.23 0.4
899.79 0.0
913.2 0.4
914.18 17.9
915.22 2.8
919.15 0.4
919.7 0.0
923.39 0.2
1435.98 0.6
1436.53 0.0
1573.18 0.2
1799.78 0.2

There are 2 similar spectra:

Id Structure Score

5397

0.98

6742

0.96

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 957.29
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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