Structure

    redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

400.0600.0800.0100012001400m/z0.0204060Abundance
Peak Intensity
406.22 0.9
424.19 66.1

Annotations:

^{0,4}A_{GalNAc} a1D-GalNAc,p/#acleavage_0_4--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
425.05 5.2

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
425.28 4.9

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
477.06 0.8
507.14 1.3

Annotations:

B^{2,4}X_{GalNAc} ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
531.15 1.0
549.17 0.8

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
550.44 0.9

Annotations:

^{2,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
551.55 0.7

Annotations:

ZZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
567.29 1.4

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
568.27 0.9

Annotations:

^{2,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
569.04 1.2

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
570.08 1.4
588.13 0.8
593.35 1.5
640.49 1.1
712.36 3.3

Annotations:

^{2,4}X_{Gal}Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#xcleavage_2_4)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
712.64 3.0
729.28 2.2

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
730.31 2.6

Annotations:

^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#xcleavage_2_4)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
730.66 1.7
731.31 0.8
754.3 3.9

Annotations:

ZZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
754.77 0.9
772.1 2.7

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
772.51 2.4
773.39 1.1
773.59 0.8
792.17 1.4
802.43 0.7
818.3 0.8

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_0_4--3?1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
845.36 1.1
857.28 1.1
865.34 0.7
874.3 5.4
874.56 2.1
875.41 1.6
878.26 1.1

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--3a2D-NeuAc,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
892.38 13.9

Annotations:

^{2,4}X_{Gal} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#xcleavage_2_4)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
893.45 1.4
896.34 0.7
910.35 1.5
916.67 0.9
932.16 0.7
934.39 31.0

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
935.01 1.2
935.57 3.7
952.32 18.7

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
953.44 4.7
953.67 3.3
961.44 0.7
976.54 0.8
985.08 0.8
986.64 0.9
994.57 1.4
1003.52 2.3
1004.65 0.8
1005.28 1.5
1019.44 0.7
1021.53 2.5
1022.08 1.6
1022.66 0.7
1023.47 1.0
1030.8 0.8
1038.37 1.3

Annotations:

C ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p--3a2D-NeuAc,p)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
1040.23 0.7
1045.32 1.9
1063.53 1.8

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--3a2D-NeuAc,p)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
1064.36 2.6
1075.19 0.8
1081.52 1.8

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--3a2D-NeuAc,p)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
1082.44 4.7
1083.36 1.0
1105.32 1.0
1106.37 0.7
1123.58 1.0
1141.09 0.8
1141.67 0.8
1147.45 2.4
1148.22 0.7
1148.73 0.8
1152.38 0.7
1162.51 0.7
1165.56 30.4
1166.37 10.2
1166.66 4.2
1182.59 1.5
1183.47 39.5
1184.51 17.3
1200.08 1.2
1200.8 0.8
1206.59 0.7
1207.29 6.2
1207.59 6.8
1207.9 1.4
1208.39 3.1
1208.67 1.2
1400.13 0.8
1431.39 0.8

There are 1 similar spectra:

Id Structure Score

1.00

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1242.47
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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