Structure

    redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
365.06 0.3
389.04 0.9

Annotations:

ZZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
389.61 0.0
424.11 10.1

Annotations:

^{0,4}A_{GalNAc} a1D-GalNAc,p/#acleavage_0_4--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
424.74 0.0
485.11 0.3
507.06 0.3

Annotations:

B^{2,4}X_{GalNAc} ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
527.29 0.5

Annotations:

^{0,4}X_{Gal}Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#xcleavage_0_4)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_0_4--3?1D-Gal,p--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
527.86 0.0
545.16 0.5
545.71 0.0
549.02 0.7

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
549.56 0.0
566.92 0.8

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
567.47 0.0
569.27 1.6

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p/#ycleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p/#zcleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
569.85 0.0
587.13 1.5

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p/#ycleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
587.69 0.0
594.1 0.2
655.18 0.6

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
655.74 0.0
670.41 0.4
670.96 0.0

Annotations:

^{2,5}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_2_5--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
694.48 0.4
695.03 0.0
712.31 2.4

Annotations:

^{0,4}X_{Gal}Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#xcleavage_0_4)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
712.6 0.5
713.14 0.0
729.15 0.5

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
729.7 0.0
730.36 0.6

Annotations:

^{0,4}X_{Gal}Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#xcleavage_0_4)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
730.95 0.0
753.89 0.4

Annotations:

ZZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
754.4 0.4
754.95 0.0
772.27 0.8

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
772.87 0.0
790.03 0.5
790.32 1.0

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
790.87 0.0
831.94 0.4
842.31 0.7

Annotations:

^{0,2}X_{NeuAc}Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p/#xcleavage_0_2)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
842.86 0.0
873.8 0.6
874.36 0.0
892.19 4.9

Annotations:

^{0,4}X_{Gal} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#xcleavage_0_4)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
893.21 0.8
893.76 0.0
917.15 0.7
917.7 0.0
918.23 0.5
918.78 0.0
934.16 1.4

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
934.72 0.0
935.34 0.9
935.94 0.0
952.33 7.1

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
953.18 1.4
953.77 0.0
1004.3 3.0
1005.23 0.3
1005.44 0.3
1022.21 2.0
1022.45 2.7

Annotations:

^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p/#xcleavage_0_2)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
1023.31 0.5
1023.86 0.0
1062.74 0.7
1063.27 0.4

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
1063.82 0.0
1071.14 0.2
1075.28 0.8
1075.85 0.0
1076.19 0.4
1076.75 0.0
1081.28 0.2

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--6a2D-NeuAc,p)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
1082.08 0.5
1082.63 0.0
1083.32 1.0
1083.9 0.0
1087.2 0.2
1087.72 0.0
1099.26 0.4
1099.8 0.0
1165.16 2.3
1165.46 2.6
1166.04 0.0
1166.38 1.1
1166.99 0.0
1183.33 8.8
1183.97 0.0
1184.49 1.9
1185.11 0.0
1186.59 0.3
1199.16 0.3
1207.38 1.3
1207.97 0.0
1243.57 0.4
1244.4 43.3
1245.31 0.0

There are 4 similar spectra:

Id Structure Score

5620

0.87

5754

0.71

5756

0.60

5755

0.56

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1242.47
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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