Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
417.07 0.3
459.03 0.2
476.01 0.1
508.01 0.6
509.13 0.2

Annotations:

Z^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{2,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
526.1 0.3
564.02 0.1
584.01 0.1
586.95 0.3

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
594.06 0.2
599.31 0.1
611.81 0.1
615.29 0.3

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_0_4--3b1D-Gal,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
630.18 0.2

Annotations:

^{0,2}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_0_2--4?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
642.22 0.1
648.32 0.2
649.31 0.4
674.95 0.1
675.49 0.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
689.41 0.4
707.29 0.6
713.17 0.1

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
730.21 0.1

Annotations:

^{2,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd
731.17 0.1

Annotations:

C ?1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
749.3 2.6

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
750.23 0.1
782.05 0.2
800.34 0.1
801.0 0.2
802.11 0.4
803.07 0.1
818.15 0.1

Annotations:

^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
819.16 0.3
842.37 0.2
844.1 0.4
860.1 0.3

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p)--6b1D-GlcNAc,p--4?1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
861.04 0.3
869.33 0.1
873.07 0.1
886.1 0.1
886.57 0.3
936.62 0.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
952.24 0.2

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd
962.32 1.0
980.26 3.0
981.24 0.3
1020.92 0.3
1022.38 1.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
1023.39 0.2
1039.03 0.1
1040.39 1.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
1041.16 0.4
1042.42 0.3
1048.84 0.1
1057.53 0.2
1064.42 0.3
1065.27 0.1
1074.91 0.1
1080.3 0.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
1080.99 0.3
1087.05 0.2
1097.72 0.3
1098.29 2.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
1098.67 0.5
1098.93 0.2
1117.03 0.5
1140.1 0.4
1150.39 0.2
1151.16 0.1
1159.74 0.1
1168.5 1.4

Annotations:

^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p/#xcleavage_0_2)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
1169.0 0.3
1169.44 0.3
1180.92 0.1
1183.05 0.2
1191.82 0.3
1200.2 0.1
1203.15 0.1
1209.31 0.3
1210.22 0.3
1243.45 0.9

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd
1243.73 0.1
1244.47 0.9
1251.13 0.1
1269.26 0.1
1329.34 4.6
1330.28 1.7
1330.57 0.4
1345.42 0.1
1347.33 0.6
1348.47 0.3
1352.99 0.1
1353.57 0.3
1354.33 0.1
1390.4 91.2

There are 6 similar spectra:

Id Structure Score

1.00

4915

1.00

1.00

4917

0.98

0.98

5631

0.98

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1388.52
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

Report errors in this entry

UniCarb-DR Creative Commons License

Supported by SIB ExPASy  |  JST / NBDCDICP