Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-2H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
348.35 0.8

Annotations:

B b1D-Gal,p/#bcleavage--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#zcleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
348.94 0.0
349.45 0.0
353.28 0.7
353.86 0.0
354.37 0.0
438.33 1.7
438.87 0.0
439.44 0.0
439.95 0.0
460.99 1.3
461.53 0.0
462.08 0.0
476.47 2.2
477.03 0.0
477.55 0.0
478.11 0.0
526.74 1.6

Annotations:

Y^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_0_4--3b1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
527.28 0.0
527.84 0.0
528.36 0.0
547.64 1.2
548.17 1.8

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-2H,0,redEnd
548.71 0.0

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-2H,0,redEnd
549.27 0.0
549.79 0.0
551.23 1.1

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
551.78 0.0
552.32 0.0
556.81 33.3

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-2H,0,redEnd
557.41 4.1
558.0 0.0
558.5 0.0
559.08 0.0
573.56 1.2
574.12 0.0
574.67 0.0
604.26 5.4
604.86 0.0
605.39 0.0
605.94 0.0
625.31 6.0
625.72 5.1
626.16 2.3
626.71 0.0
627.27 0.0
627.79 0.0
629.76 0.7
630.32 0.0
630.86 0.0
639.16 1.3
639.71 0.0
640.27 0.0
649.28 2.7

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-2H,0,redEnd
649.8 3.0

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-2H,0,redEnd
650.4 0.0
650.94 0.0
651.48 0.0
658.81 0.5
659.37 0.0
659.91 0.0
690.12 1.0
690.69 0.0
691.21 0.0
700.31 1.0
700.86 0.0
701.4 0.0
744.22 0.8
744.78 0.0
745.33 0.0
790.03 1.8
790.47 4.0

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
791.12 1.9
791.69 0.0
792.21 0.0
952.11 1.2

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
952.69 0.0
953.2 0.0
953.5 1.2
954.05 0.0
954.61 0.0
1036.86 0.5
1037.44 0.0
1037.95 0.0
1056.41 1.2
1056.96 0.0
1057.52 0.0
1095.99 0.8

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
1096.66 0.8
1097.11 1.0
1097.52 1.1
1098.1 0.0
1098.62 0.0
1114.33 16.0

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
1114.67 4.4
1114.93 1.6
1115.74 2.4
1116.12 0.0
1116.35 0.0
1116.86 0.0

There are 1 similar spectra:

Id Structure Score

1.00

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1462.56
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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