Structure

    redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6b1D-GlcNAc,p--??1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
219.92 0.7
262.37 1.1

Annotations:

^{0,4}A_{GalNAc}Y a1D-GalNAc,p/#acleavage_0_4--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
290.13 66.3

Annotations:

B ?1D-Gal,p/#bcleavage--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
291.17 2.5
291.77 0.0
292.27 1.0

Annotations:

CY ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-2H,0,redEnd Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
357.32 1.4

Annotations:

^{0,4}A_{GalNAc} a1D-GalNAc,p/#acleavage_0_4--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-2H,0,redEnd YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
357.87 0.0
465.91 0.6
493.13 0.7
494.07 0.8
539.29 0.6

Annotations:

^{2,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_4--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
542.46 1.3
562.36 0.7
563.33 1.0
569.07 1.5

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
569.63 0.0
570.24 0.6
579.16 0.5
597.25 0.9
656.24 1.0

Annotations:

^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-2H,0,redEnd
677.14 1.4

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
677.7 0.0
686.96 0.6

Annotations:

C^{2,4}X_{Gal} ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
693.97 1.0
735.5 2.2
735.99 0.8
736.9 1.3
737.46 0.0
772.04 2.6

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
772.46 0.8
773.5 0.7
789.96 0.7
790.48 3.0

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
791.04 0.0
835.39 1.0
842.39 1.0

Annotations:

Z^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
847.59 0.5
874.72 0.7

Annotations:

^{0,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#xcleavage_2_4)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
876.49 0.5

Annotations:

CY ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
878.2 1.3

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
892.21 0.8

Annotations:

^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#xcleavage_2_4)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
910.34 1.0
952.37 30.9

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
953.15 3.2
953.64 8.4
954.52 1.8
955.1 0.0
991.19 1.1
1022.48 1.0

Annotations:

Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
1040.2 2.6
1040.98 2.0
1041.3 0.7
1045.56 1.4

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1046.12 0.0
1061.33 1.4
1061.88 0.0
1063.61 1.9

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1063.83 1.3
1064.38 0.0
1065.55 1.0
1081.19 1.7
1081.54 4.3

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1082.47 2.0
1083.02 0.0
1096.55 0.6
1099.34 0.7
1108.95 0.8
1165.48 1.0
1183.38 0.7

Annotations:

^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#xcleavage_2_4)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd ^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1184.59 1.1
1184.85 0.7
1185.37 0.0
1199.07 1.6
1199.61 0.0
1207.37 2.2
1207.57 0.8
1224.18 0.8
1224.48 0.9
1224.86 1.0
1225.64 2.9

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1226.17 0.0
1226.68 2.9
1227.28 0.0
1241.14 1.0
1241.4 2.4
1241.78 1.0
1242.62 9.3
1243.48 140.6

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1244.51 59.3
1245.49 19.4
1246.32 0.0
1266.68 1.6
1267.44 1.6
1267.98 0.0
1285.64 1.3
1286.46 1.0
1293.07 0.8
1338.69 0.9

There are 2 similar spectra:

Id Structure Score

1.00

8074

0.94

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1533.56
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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