Structure

    redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6b1D-GlcNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

200.0400.0600.0800.01000120014001600m/z0.0501.0e+21.5e+22.0e+2Abundance
Peak Intensity
287.95 1.3
290.21 36.3

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
291.1 8.2
291.71 0.0
300.16 3.0
300.71 0.0
501.83 1.2

Annotations:

Z^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p/#zcleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-2H,0,redEnd
502.37 0.0
567.27 1.6

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd BY a1D-GalNAc,p/#bcleavage--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ a1D-GalNAc,p/#ccleavage--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
584.34 1.5
584.87 0.0

Annotations:

CY ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd CY a1D-GalNAc,p/#ccleavage--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
587.41 3.1

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
587.96 0.0
614.07 4.0
614.62 0.0
664.19 4.3
664.77 0.0
672.94 3.7

Annotations:

C ?1HexNAc,p/#ccleavage--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
673.52 0.0
686.9 2.5
687.45 0.0
693.34 2.8
693.89 0.0
701.71 2.2
702.27 0.0
722.8 4.7

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-2H,0,redEnd Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
723.36 0.0
728.97 1.0

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
730.2 2.2

Annotations:

^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
730.77 0.0
742.9 1.6
743.45 0.0
757.83 5.9

Annotations:

^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-2H,0,redEnd
758.37 0.0
772.31 2.0

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
772.86 0.0
773.37 2.5
773.94 0.0
774.67 3.3
775.22 0.0
782.96 3.5
783.53 0.0
826.12 1.7
833.49 1.5
836.76 3.0
837.31 0.0
931.41 2.5
931.95 0.0

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
952.45 1.8

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
953.02 0.0
953.38 1.6
953.94 0.0
1045.34 2.3

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1045.89 0.0
1062.24 1.8
1062.79 0.0
1064.47 2.0
1065.03 0.0
1081.6 5.0

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1082.19 0.0
1155.53 28.8

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
1156.51 10.6
1156.73 2.9
1157.22 4.2
1157.78 0.0
1207.88 1.5

Annotations:

Z^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p/#zcleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
1210.32 1.9
1210.88 0.0
1225.52 1.2

Annotations:

Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1243.21 5.2
1243.67 6.8

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1244.18 1.5
1349.55 1.6
1354.5 1.5

Annotations:

Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
1355.04 0.0
1389.1 2.4
1389.69 0.0
1408.7 1.5
1409.22 0.0
1410.6 2.6
1410.96 3.6
1411.53 0.0
1413.26 4.9
1413.82 0.0
1416.62 3.1
1417.19 0.0
1428.67 5.4

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1429.28 0.0
1429.61 2.6
1430.19 0.0
1444.51 1.8
1446.57 228.4

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p--??1D-Gal,p--??1HexNAc,p--??2D-NeuAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1447.17 23.8
1447.62 93.1
1448.75 14.5
1449.19 1.7
1449.9 1.8
1450.46 0.0
1538.06 2.0
1538.61 0.0

N/A

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1736.64
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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