Structure

    redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p)--6b1D-GlcNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
290.02 3.1

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
298.41 1.4
344.2 5.5
347.93 3.3

Annotations:

BY ?1D-Gal,p/#bcleavage--??1HexNAc,p(--??1HexNAc,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd CZ ?1D-Gal,p/#ccleavage--??1HexNAc,p(--??1HexNAc,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
348.36 3.3

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
364.38 2.4

Annotations:

B a1D-GalNAc,p/#bcleavage--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
405.15 1.7

Annotations:

BY ?1D-Gal,p/#bcleavage--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-Gal,p/#ccleavage--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
460.36 2.6
462.33 2.0
489.36 4.3
495.12 3.5

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
499.38 2.0
513.15 2.4

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
513.44 0.9
540.24 8.6

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
546.45 5.1
549.23 0.9

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd BZ a1D-GalNAc,p/#bcleavage--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
550.98 5.0
551.28 35.9

Annotations:

B ?1D-Gal,p/#bcleavage--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
552.09 3.6
569.67 3.7

Annotations:

C ?1D-Gal,p/#ccleavage--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
584.84 1.8

Annotations:

CY ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd CY a1D-GalNAc,p/#ccleavage--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd
588.53 13.0

Annotations:

^{2,4}A_{GalNAc}Z ?1D-GalNAc,p/#acleavage_2_4--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-2H,0,redEnd
612.29 2.2

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
621.52 14.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
621.96 4.2
625.18 7.5

Annotations:

B^{2,5}X_{Fuc} a1D-GalNAc,p/#bcleavage--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p/#xcleavage_2_5$MONO,Und,-H,0,redEnd
658.21 2.1
665.67 1.0
666.36 1.7
677.97 1.7
689.89 6.6
713.2 8.7
713.49 10.8

Annotations:

B a1D-GalNAc,p/#bcleavage--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-2H,0,redEnd YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p/#ycleavage)--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p/#zcleavage)--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
714.52 6.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
715.28 3.7
716.57 2.7

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
722.91 75.9

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p/#ycleavage)--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
723.4 54.1
723.95 14.3
731.52 2.5

Annotations:

C a1D-GalNAc,p/#ccleavage--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
731.88 3.7
745.63 2.2
749.69 6.6
770.49 5.4
773.58 3.2

Annotations:

^{2,4}A_{GalNAc} a1D-GalNAc,p/#acleavage_2_4--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
776.82 2.5
791.57 16.5
794.03 8.3
794.42 4.7
797.71 2.0
806.33 16.1
820.19 4.3
825.2 5.3
825.76 1.6
826.29 2.4
837.25 1.4
840.15 1.5
842.65 5.9

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd Z^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
843.56 4.5
916.66 3.7

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
952.48 3.6

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
952.87 2.8
1021.54 1.9

Annotations:

^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1063.36 4.2

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1063.59 2.6
1064.18 2.0
1079.51 1.9

Annotations:

^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#xcleavage_0_4--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
1081.56 133.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1082.47 31.8
1082.72 33.9
1083.09 1.8
1083.8 2.5
1183.54 2.6
1200.74 1.3
1203.85 2.3
1207.41 1.7
1225.54 9.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1226.44 7.1
1226.85 5.4
1243.53 238.6

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1244.59 63.7
1244.88 46.7
1245.83 2.0
1379.77 2.1
1387.69 2.6
1388.1 3.9
1405.63 1.1
1410.98 2.7

Annotations:

Z^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd ZZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p/#zcleavage)--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1411.56 0.9
1417.11 2.6
1428.7 39.1

Annotations:

Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p/#ycleavage)--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p/#zcleavage)--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1429.63 21.9
1429.94 3.7
1430.65 2.6

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p)--??1L-Fuc,p)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1431.01 1.8
1446.92 17.7

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p(--??1HexNAc,p/#ycleavage)--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1447.67 12.8
1447.96 3.2
1484.58 4.8

There are not related spectra

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1794.68
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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