Structure

    redEnd--??1D-GalNAc,p(--??1D-GalNAc,p)--6a2D-NeuAc,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd

Rainbow trout mucus O-glycosylation

GlyTouCan Accession Number: Loading...

Peak Intensity
290.19 27.2

Annotations:

BY ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p--??2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--6a2D-NeuAc,p--??2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd B a2D-NeuAc,p/#bcleavage--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
291.1 5.4
303.27 0.7
308.04 0.6

Annotations:

CY ?1D-GalNAc,p/#ccleavage--6a2D-NeuAc,p--??2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd C a2D-NeuAc,p/#ccleavage--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
308.27 0.8

Annotations:

CY ?1D-GalNAc,p/#ccleavage--6a2D-NeuAc,p--??2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd C a2D-NeuAc,p/#ccleavage--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
346.06 0.5
362.09 0.8
379.84 1.3
380.21 2.7
380.44 2.3
387.15 0.8
406.71 0.9

Annotations:

Z redEnd--??1D-GalNAc,p(--??1D-GalNAc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
407.27 2.0

Annotations:

Z redEnd--??1D-GalNAc,p(--??1D-GalNAc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
425.32 6.0

Annotations:

Y redEnd--??1D-GalNAc,p(--??1D-GalNAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
426.22 1.0
426.4 0.6
440.81 0.6
451.37 1.1
465.42 1.0
477.16 0.8

Annotations:

ZZ redEnd--??1D-GalNAc,p(--??1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p--??2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
478.31 1.5
479.16 1.3
493.06 1.5
493.41 0.6
495.27 3.3

Annotations:

ZY redEnd--??1D-GalNAc,p(--??1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p--??2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--??1D-GalNAc,p/#ycleavage)--6a2D-NeuAc,p--??2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
500.86 0.8
501.43 0.6
509.11 0.6
513.33 2.4

Annotations:

YY redEnd--??1D-GalNAc,p(--??1D-GalNAc,p/#ycleavage)--6a2D-NeuAc,p--??2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
514.3 1.5
515.58 1.2
519.2 8.4
521.52 0.7
536.2 0.5
536.7 2.5
537.41 28.2
538.43 2.3
539.44 0.7
548.28 2.2
563.35 2.9
564.41 1.2
579.28 5.8
579.95 1.7
580.33 5.1

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
581.28 319.3

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
582.29 62.1
583.29 2.0
594.07 0.5
608.14 0.6
608.42 1.4
615.15 0.5
619.47 0.6
620.18 0.6
626.47 1.3
638.31 7.8
638.81 0.7
639.38 1.2
654.55 1.4
656.47 2.7
657.27 2.9
672.23 0.6
672.63 1.0
680.29 2.3
680.57 1.3
698.36 87.4

Annotations:

Z redEnd--??1D-GalNAc,p(--??1D-GalNAc,p)--6a2D-NeuAc,p--??2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
699.41 18.7
707.22 1.2
714.12 4.5
714.43 7.7
714.85 1.1
715.27 5.0
716.38 1432.8

Annotations:

Y redEnd--??1D-GalNAc,p(--??1D-GalNAc,p)--6a2D-NeuAc,p--??2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
717.4 252.0
718.54 1.6
724.32 0.9
741.32 0.9
741.86 1.6
767.36 1.1
768.68 1.5
777.18 0.6
785.38 0.6

Annotations:

Z redEnd--??1D-GalNAc,p(--??1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
786.27 0.5

Annotations:

Z redEnd--??1D-GalNAc,p(--??1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
786.57 0.5

Annotations:

Z redEnd--??1D-GalNAc,p(--??1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
787.1 0.7

Annotations:

Z redEnd--??1D-GalNAc,p(--??1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
796.92 0.6
804.27 0.5

Annotations:

Y redEnd--??1D-GalNAc,p(--??1D-GalNAc,p/#ycleavage)--6a2D-NeuAc,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
805.23 0.6

Annotations:

Y redEnd--??1D-GalNAc,p(--??1D-GalNAc,p/#ycleavage)--6a2D-NeuAc,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
851.59 0.7
855.28 0.8
866.48 0.9
869.28 0.9
881.49 1.2
894.32 1.5
898.69 0.6
911.21 1.4
911.54 5.0
912.72 2.1
929.22 2.0
939.57 1.0
945.11 0.7

There are 3 similar spectra:

Id Structure Score

6815

0.98

4873

0.97

0.97

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1006.38
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

N/A

HPLC

Column

Method

  • 78 min gradient with approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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