Structure

    redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p)--6b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p--??1D-Gal,p--??2D-NeuAc,p$MONO,Und,-2H,0,redEnd

Integrated O-glycomic and proteomic signatures of spontaneous and butyrate-stimulated colorectal cancer cell line differentiation

GlyTouCan Accession Number: Loading...

Peak Intensity
290.03 1977.0

Annotations:

B ?1D-Gal,p/#bcleavage--??2D-NeuAc,p$MONO,Und,-H,0,redEnd B b1D-Gal,p/#bcleavage--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
817.26 443.0

Annotations:

B b1D-GlcNAc,p/#bcleavage--??1D-Gal,p--??1D-GlcNAc,p--??1D-Gal,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
934.31 180.0

Annotations:

YZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p--??1D-Gal,p--??2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p--??1D-Gal,p--??2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
1225.52 437.0

Annotations:

Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p)--6b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p--??1D-Gal,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
1243.35 287.0

Annotations:

Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p)--6b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p--??1D-Gal,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
1387.41 125.0

Annotations:

Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p)--6b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p--??1D-Gal,p--??2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p--??1D-Gal,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd
1405.46 14071.0

Annotations:

Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p)--6b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p--??1D-Gal,p--??2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--??2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p--??1D-Gal,p--??2D-NeuAc,p$MONO,Und,-H,0,redEnd

There are 6 similar spectra:

Id Structure Score

5187

0.97

3527

0.87

4937

0.86

0.86

8092

0.82

5878

0.62

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1695.61
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

N/A

HPLC

Column Hypercarb

Method

  • 73min gradient with 0,6ul/min run rate
  • 10mM ammonium bicarbonate
  • 60% ACN, 10mM ammonium bicarbonate

Mass Spec

Bruker Daltonik amaZon Speed ETD ETD

MIRAGE Structural data

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