Structure

    redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd

O-glycans from rainbow trout gill cell line RTgillW1

File Name: 2023_RTGillW1.gwp

GlycoPOST Entry: GPST000335

GlyTouCan Accession Number: Loading...

Peak Intensity
137.84 0.4

Annotations:

Z redEnd--??1D-GalNAc,p--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd B ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd C ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd ^{2,5}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_5--3b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd ^{2,5}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_5--3b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd ^{0,2}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_2--3b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1S/#lcleavage$MONO,Und,-H,0,redEnd
146.85 0.5

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd C ?1D-GalNAc,p/#ccleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd C ?1D-GalNAc,p/#ccleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{0,3}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_3--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
150.86 0.3

Annotations:

B b1D-Gal,p/#bcleavage--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd ^{1,4}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_1_4--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ^{1,4}A_{Gal} b1D-Gal,p/#acleavage_1_4--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd B ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd C ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd ^{2,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_4--3b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd ^{1,5}A_{GalNAc} ?1D-GalNAc,p/#acleavage_1_5--3b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
156.08 1.5

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd C ?1D-GalNAc,p/#ccleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1S/#lcleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1S/#lcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1S)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1S)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{0,2}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_2(--3b1D-Gal,p--??1S)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1S/#lcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
197.03 0.4

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd B b1D-Gal,p/#bcleavage--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd B ?1D-GalNAc,p/#bcleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd B b1D-Gal,p/#bcleavage--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd ^{1,4}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_1_4--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd C ?1D-GalNAc,p/#ccleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd C b1D-Gal,p/#ccleavage--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd ^{2,5}A_{GalNAc}Z ?1D-GalNAc,p/#acleavage_2_5(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
204.0 1.3

Annotations:

C ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd C ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--??1S/#lcleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd B ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd ^{2,5}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_5--3b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd ^{0,2}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_2--3b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd ^{1,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_1_4--3b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd redEnd--??1D-GalNAc,p--3b1D-Gal,p--??1S/#lcleavage$MONO,Und,-H,0,redEnd
212.87 0.5
222.88 0.5
232.86 0.3
240.94 13.1
241.93 0.4
259.0 1.8
261.02 1.0
276.01 0.5
284.0 1.4
294.95 0.5
302.04 1.2
312.97 0.5
315.94 0.7
317.0 0.9
318.87 0.9
319.16 0.6
320.96 1.6
324.95 0.5
333.03 0.4
335.17 0.4
338.89 0.6
343.0 0.7
343.53 0.3
345.12 0.8
345.51 0.6
346.92 0.7
348.76 0.7
350.98 0.5
351.92 0.5
353.2 0.3
354.89 0.4
356.08 0.4
357.59 0.4
359.93 0.6
360.95 0.7
362.88 4.5
363.74 0.6
364.81 15.2
365.39 0.9
365.76 1.0
366.13 0.3
366.85 9.4
373.05 0.5
374.76 0.4
375.37 0.4
376.77 0.6
377.08 0.3
377.91 1.4
378.87 0.7
379.86 4.8
380.18 0.8
380.44 0.3
382.05 0.9
384.39 0.3
385.07 0.4
385.99 0.4
389.92 0.4
390.78 0.4
392.81 0.6
394.83 8.9
395.88 1.5
396.79 0.7
399.75 0.3
400.95 1.8
401.3 1.0
402.0 1.2
402.89 13.3
403.43 0.3
404.02 5.6
404.81 24.7
405.29 2.2
405.88 2.0
406.79 11.7
409.48 0.9
412.44 0.6
417.06 1.5
418.92 2.4
419.96 3.9
420.91 10.1
422.04 2.0
422.75 2.7
423.99 0.3
424.83 1.4
426.62 1.6
426.96 1.2
427.25 0.3
428.0 0.4
428.86 0.4
429.11 0.3
433.06 0.4
435.48 0.6
436.99 0.3
438.87 0.6
484.92 0.4

There are 1 similar spectra:

Id Structure Score

7692

1.00

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 463.12
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Cell line - RTgillW1

Mass Spec

Manufacturer: Thermo Fisher

Model: LTQ Linear Ion Trap

Ion Mode: Negative

MIRAGE Structural data

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