Pancreatic cancer cell lines Pa-Tu-8988S and Pa-Tu-8988T

Zhang T, Manuscript

Retention Time Recorded Precursor Mass Structure
1.7 384.19 [M -1H]1- redEnd--??1D-GalNAc,p--3b1D-Gal,p@360$MONO,Und,-H,0,redEnd
3.4 513.16 [M -1H]1- redEnd--??1D-GalNAc,p--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
16.8 675.26 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
17.0 587.21 [M -1H]1- redEnd--??1D-GalNAc,p--3b1D-Gal,p--4a1D-GlcNAc,p$MONO,Und,-H,0,redEnd
20.3 587.21 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
27.3 675.26 [M -1H]1- redEnd--??1D-GalNAc,p--3b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
27.5 895.35 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--3a1L-Fuc,p@270s)--4b1D-Gal,p$MONO,Und,-H,0,redEnd
33.9 966.3 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
37.0 1098.41 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p(--2a1L-Fuc,p@270s)--3b1D-GalNAc,p$MONO,Und,-H,0,redEnd
37.5 749.31 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
41.1 993.45 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--3b1D-Gal,p--3b1D-GlcNAc,p)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
42.5 878.334 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
42.7 1127.41 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p(--4b1D-GalNAc,p)--3a1L-Fuc,p$MONO,Und,-H,0,redEnd
42.8 1535.5 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p(--??1D-Gal,p--2a1L-Fuc,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
45.2 1040.41 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p@360)--6b1D-GlcNAc,p@360--4b1D-Gal,p}--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
46.3 1186.4 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--??1L-Fuc,p@270s)--??1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
47.2 1155.44 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p--4a1D-GlcNAc,p)--6b1D-GlcNAc,p--4b1D-Gal,p--4a1D-GlcNAc,p$MONO,Und,-H,0,redEnd
48.2 1389.59 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--4b1D-Gal,p(--2a1L-Fuc,p)--3a1D-GalNAc,p$MONO,Und,-H,0,redEnd
51.9 1098.41 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p(--2a1L-Fuc,p@270s)--3a1D-GalNAc,p)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
54.1 1040.41 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p@360--3a2D-NeuAc,p)--6b1D-GlcNAc,p@360--4b1D-Gal,p$MONO,Und,-H,0,redEnd
54.7 1186.4 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
55.0 895.35 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p@270s$MONO,Und,-H,0,redEnd
58.4 1114.42 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p--3b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
59.8 1114.42 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3b1D-GlcNAc,p--??1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
60.2 1331.44 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--4b1D-Gal,p--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
62.9 1098.41 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p@360--4a1D-GlcNAc,p)--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
63.5 1040.42 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p@360)--6b1D-GlcNAc,p@360--4b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
64.6 1186.4 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--3b1D-Gal,p--2a1L-Fuc,p@270s$MONO,Und,-H,0,redEnd
65.0 1479.5 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p(--3b1D-GlcNAc,p--?b1D-Gal,p)--6b1D-GlcNAc,p--?b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
65.0 739.25 [M -2H]2- redEnd--??1D-GalNAc,p(--3b1D-Gal,p(--3b1D-GlcNAc,p--?b1D-Gal,p)--6b1D-GlcNAc,p--?b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-2H,0,redEnd
68.6 1040.42 [M -1H]1- redEnd--??1D-GalNAc,p--3b1D-Gal,p--3b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
71.8 1331.44 [M -1H]1- redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
71.8 665.22 [M -2H]2- redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--4b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-2H,0,redEnd

Structure Format

SNFG Oxford Text

Biological Context

Taxonomy - Homo Sapiens
Tissue - Pancreas

HPLC

Column Hypercarb

Method

  • 60 gradient with 0.6 μl/min run rate
  • 10 mM ammonium bicarbonate
  • 60% (V/V) acetonitrile/10 mM ammonium bicarbonate

Mass Spec

Bruker Daltonik amaZon Speed ETD ETD

MIRAGE

See report

UniCarb-DR Creative Commons License

Supported by SIB ExPASy  |  JST / NBDCDICP