Structure

    redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p$MONO,Und,-H,0,redEnd

An E-workflow for implementing guidelines in glycomics mass spectrometry

GlyTouCan Accession Number: Loading...

Peak Intensity
276.17 2.6
359.09 1.9

Annotations:

^{1,5}A_{GalNAc}Z ?1D-GalNAc,p/#acleavage_1_5--3b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
364.15 3.7

Annotations:

B b1D-GlcNAc,p/#bcleavage--??1D-Gal,p--??1D-GlcNAc,p$MONO,Und,-H,0,redEnd
364.35 4.7

Annotations:

B b1D-GlcNAc,p/#bcleavage--??1D-Gal,p--??1D-GlcNAc,p$MONO,Und,-H,0,redEnd
365.25 2.6
407.13 29.5

Annotations:

Z redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
408.25 6.2
425.08 6.4

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
479.35 2.1
527.17 5.5
567.07 2.5

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p$MONO,Und,-H,0,redEnd
587.27 2.1

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
588.06 4.3
610.3 4.6
673.13 1.7
729.88 2.3

Annotations:

^{0,4}X_{GlcNAc} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd ^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
730.52 6.2

Annotations:

^{0,4}X_{GlcNAc} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd ^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p--??1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
731.24 1.9
748.03 4.6
748.32 6.3

There are 8 similar spectra:

Id Structure Score

6724

0.89

5430

0.88

5716

0.85

6803

0.83

5684

0.74

3755

0.70

5518

0.67

7887

0.52

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 789.32
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Bos Taurus
Tissue - Cervix Mucus

HPLC

Column NA

Method

  • 78 min gradient with Approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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