Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd

An E-workflow for implementing guidelines in glycomics mass spectrometry

GlyTouCan Accession Number: Loading...

Peak Intensity
257.1 0.4
262.93 1.9
280.82 0.4

Annotations:

^{0,2}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_0_2--4b1D-Gal,p$MONO,Und,-H,0,redEnd
289.04 0.4
305.34 0.4

Annotations:

Y^{0,2}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
306.07 3.1

Annotations:

^{1,3}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_3)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
325.28 0.4

Annotations:

C ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
329.22 0.7
330.38 0.7
331.43 0.5
347.12 3.7

Annotations:

Z^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
347.31 1.2

Annotations:

Z^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
348.09 1.4

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
349.3 0.5
353.06 0.5
359.11 1.0
364.14 8.3

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
365.15 6.5

Annotations:

Y^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
366.24 1.2

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
371.31 0.4
372.01 1.1
380.35 0.5
381.76 1.4

Annotations:

C ?1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
382.1 1.0

Annotations:

C ?1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
389.14 82.0

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
390.07 8.0
390.42 1.5
392.06 1.1
392.34 0.3
407.26 17.5

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
408.18 2.2

Annotations:

^{1,3}A_{GalNAc} ?1D-GalNAc,p/#acleavage_1_3--3b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd ^{0,2}X_{Fuc}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_2)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
424.08 5.0

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,5}X_{Fuc}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_5)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
424.34 3.5

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,5}X_{Fuc}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_5)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
450.06 0.4
461.6 0.5
474.28 1.3
474.74 1.1
482.18 0.9
484.98 2.3
489.14 0.5
491.2 1.6
509.18 2.6

Annotations:

Z^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_3)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd Z^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Z^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd Z^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
510.04 2.1
510.46 0.6
512.27 7.0

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
512.5 2.4

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
513.14 1.3

Annotations:

Y^{3,5}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_3_5$MONO,Und,-H,0,redEnd Y^{3,5}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_3_5$MONO,Und,-H,0,redEnd
521.02 2.7
521.29 2.4
522.3 0.7
522.99 0.4
527.2 28.9

Annotations:

Y^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_3)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Y^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd Y^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
527.85 0.6
528.29 5.7
529.76 2.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
530.06 3.0

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
530.34 1.0

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
531.09 0.4
533.28 0.6
534.1 0.6
544.98 1.2
545.4 1.3
551.01 2.6

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
551.25 1.6

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
551.98 0.6
553.33 0.4
568.34 0.7
569.2 493.3

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
570.19 111.0
587.22 13.8

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
588.35 1.1
590.95 1.1
608.81 0.6
623.26 0.5
636.38 1.1
647.11 0.7
655.32 2.7

Annotations:

^{1,3}X_{Fuc}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_1_3)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Fuc}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
656.32 2.4
665.06 0.5
668.07 0.5
669.06 0.8
671.16 0.7

Annotations:

^{0,4}X_{Fuc}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_4)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd Z^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Z^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd Z^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
673.26 3.1

Annotations:

^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{1,3}X_{Fuc}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_1_3)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Fuc}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
674.44 2.3
676.07 0.5
677.37 0.7
690.34 0.6
691.22 4.0
692.14 0.6
694.25 1.0
701.74 3.3

Annotations:

^{1,5}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_1_5(--3b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
707.1 0.8
707.53 0.5
708.06 0.8
715.18 35.9

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
716.2 4.2
716.42 2.7
730.88 1.4

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
731.34 3.0

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
731.78 0.5
732.36 2.2
732.86 1.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
733.35 7.6

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
734.1 1.9
735.38 1.6
738.24 1.7
739.89 0.9
742.26 1.6
742.98 0.5
748.75 0.6
749.26 5.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
750.13 0.4
750.41 1.3
751.03 0.6
771.67 1.0
772.2 0.9
773.77 1.7
787.14 0.5
791.25 0.9

Annotations:

^{0,2}X_{Fuc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_2)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,5}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_2_5$MONO,Und,-H,0,redEnd
792.97 0.4
800.01 1.2
814.53 1.8
820.66 0.8
824.05 1.1
826.16 0.4
834.26 1.8
835.22 20.8

Annotations:

^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{1,3}X_{Fuc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_1_3)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,4}X_{Fuc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
835.98 3.0
836.24 5.4
836.5 2.3
850.25 0.7
851.14 0.6

Annotations:

^{0,4}X_{Fuc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_4)--6b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
853.26 49.2
854.13 11.0
854.39 2.6
858.2 1.0
862.41 0.6
863.2 0.5
863.52 1.4
863.8 2.8
872.42 1.5
938.96 0.4
957.1 1.7
1038.08 1.2
1038.38 1.4
1053.95 0.7
1054.67 0.6
1055.34 2.4
1070.43 0.4
1117.47 1.3
1157.01 0.4
1181.36 0.6
1218.07 1.1
1251.07 0.7
1278.26 0.6
1380.27 1.8
1381.45 0.3
1382.14 1.4
1439.54 0.8
1446.45 0.6
1462.5 0.5
1463.07 0.5
1465.44 0.7
1482.24 0.8
1486.41 0.8
1502.03 5.2
1502.32 3.3
1502.57 1.4
1503.47 2.0
1539.06 0.4
1543.06 0.5
1608.16 0.4
1712.66 0.4

There are 13 similar spectra:

Id Structure Score

5579

0.99

5792

0.98

4244

0.98

5236

0.98

3885

0.98

7654

0.97

7670

0.97

6809

0.97

7225

0.96

7891

0.86

5789

0.78

7936

0.63

3734

0.53

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 894.35
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Bos Taurus
Tissue - Cervix Mucus

HPLC

Column NA

Method

  • 78 min gradient with Approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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