Structure

    redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
382.08 1.4

Annotations:

CY a1D-GalNAc,p/#ccleavage--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd C a1D-GalNAc,p/#ccleavage--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
405.26 0.6
424.13 56.3

Annotations:

^{0,4}A_{GalNAc} a1D-GalNAc,p/#acleavage_0_4--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,4}A_{GalNAc}Y a1D-GalNAc,p/#acleavage_2_4--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd
519.3 1.2
525.16 0.3
526.39 0.6
527.22 0.5

Annotations:

^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_0_4--3?1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
531.21 0.6
549.25 1.4

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
549.83 0.8
550.34 0.6

Annotations:

^{2,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
566.95 2.9

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
567.37 1.0
568.14 0.5

Annotations:

^{2,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
569.02 0.4

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
586.81 0.8

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
610.03 0.3

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
644.39 1.0
675.3 1.7
688.33 0.7
693.85 0.5
694.31 1.1
710.77 0.6
712.17 6.7

Annotations:

^{0,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_0_4--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
728.59 0.3
728.93 2.7
729.33 2.9

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
730.37 2.8

Annotations:

^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_0_4--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
748.28 1.5
771.89 1.3
772.23 5.0

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
772.61 0.5
790.25 4.3

Annotations:

YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
843.75 1.1
844.07 2.1
849.47 1.5
850.07 1.0
851.34 0.4
862.43 1.0
867.1 1.3
868.06 0.5
874.28 0.8
876.21 0.6

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p--3a1D-GalNAc,p/#xcleavage_0_4--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
892.24 69.4
897.49 0.6
910.02 2.3
910.43 7.3
911.22 0.5
915.21 0.5
918.52 2.0

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
927.38 1.9
933.77 1.4
934.11 3.6

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
934.37 3.3
935.11 0.6
939.26 1.5
952.24 114.1

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
953.24 0.4
969.97 1.0
975.01 0.8

Annotations:

YZ redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
987.06 1.6
987.49 0.5
1017.25 1.2
1019.46 0.7
1023.63 1.0
1028.53 0.9
1029.25 18.4

Annotations:

^{1,4}A_{GalNAc}Z ?1D-GalNAc,p/#acleavage_1_4--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
1030.55 0.9
1037.35 1.2
1043.38 0.8
1047.31 12.6
1047.73 0.8
1060.54 2.0
1077.43 1.1
1077.73 0.6
1078.35 4.9

Annotations:

B ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
1079.12 2.0
1079.43 0.4
1080.08 0.3
1089.3 9.8
1089.85 0.6
1119.55 0.5
1121.48 3.8

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
1137.1 2.9
1137.37 3.7

Annotations:

Z redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
1139.35 2.6

Annotations:

Y redEnd--??1D-GalNAc,p--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
1139.66 0.6
1151.3 2.7
1180.79 0.9
1193.23 1.6
1193.68 0.5
1241.08 10.9
1241.47 13.8
1242.22 1.3
1259.46 7.2
1260.09 1.5
1265.01 0.6
1301.22 0.9
1302.18 9.3
1302.49 9.1

There are 6 similar spectra:

Id Structure Score

5467

0.93

4823

0.86

5469

0.80

5471

0.75

4822

0.74

5470

0.72

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1300.51
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

Report errors in this entry

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