Structure

    redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
363.95 0.5

Annotations:

BY ?1D-GalNAc,p/#bcleavage@405--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd B ?1D-GalNAc,p/#bcleavage@405--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage@405--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
366.09 0.2

Annotations:

C ?1HexNAc,p/#ccleavage--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p/#zcleavage)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
424.09 9.5

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4@405--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
425.06 0.2

Annotations:

YY redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
465.96 0.7
545.24 0.4
549.77 0.5
550.57 0.4
560.97 0.6
568.14 0.7
569.07 2.3

Annotations:

C b1D-Gal,p/#ccleavage--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#zcleavage)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
569.42 0.7
586.65 0.4
586.84 0.5

Annotations:

YY redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
587.26 0.4
609.2 1.7

Annotations:

^{2,4}A_{GalNAc}Z ?1D-GalNAc,p/#acleavage_2_4@405--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
612.25 0.3
622.45 0.4
670.07 0.4
688.38 0.6
694.39 0.2
700.24 0.3
706.03 0.3
711.95 1.3
712.2 0.9

Annotations:

^{0,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p/#xcleavage_0_4@405--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
712.42 0.4

Annotations:

^{0,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p/#xcleavage_0_4@405--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
713.28 0.3

Annotations:

B ?1D-GalNAc,p/#bcleavage@405--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
729.32 0.2
730.21 2.0

Annotations:

^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_0_4@405--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd
730.52 0.7
748.21 0.6
749.29 1.7

Annotations:

Y redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
750.32 0.5
754.25 0.4

Annotations:

ZZ redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZZ redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
755.18 0.4
768.22 0.5
772.14 3.4

Annotations:

YZ redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
773.14 26.0

Annotations:

^{2,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_4@405--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
774.02 0.2
790.26 0.7

Annotations:

YY redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
815.17 0.7
844.09 0.3
844.49 0.3
850.22 0.4
866.92 0.3
870.37 0.5
874.15 0.3
892.27 18.6
893.17 0.4
898.15 0.4
910.19 2.2
910.44 1.6
911.28 0.3
915.74 0.5
916.27 1.2
918.15 0.4

Annotations:

Z redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
934.38 0.7

Annotations:

Z redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
935.96 0.7

Annotations:

Y redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
936.31 0.3
952.23 27.8

Annotations:

Y redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
953.14 0.6
953.38 1.2
960.14 0.7
1000.81 0.3
1017.15 0.8
1017.44 0.5
1028.7 0.7
1029.32 1.5
1036.27 0.3
1047.5 0.8
1059.14 0.3
1060.33 1.4
1078.33 1.0
1078.72 0.3
1079.42 0.3
1080.43 0.3
1089.12 0.4
1095.36 0.4
1097.92 0.4
1098.58 0.8
1119.11 0.5
1120.36 0.4
1121.23 0.4

Annotations:

Z redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
1138.12 0.3
1139.41 1.3

Annotations:

Y redEnd--??1D-GalNAc,p@405(--3b1D-Gal,p--??1HexNAc,p--??1HexNAc,p--??1L-Fuc,p)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
1139.67 0.4
1139.95 0.3
1151.0 0.3
1193.32 1.8
1198.98 0.6
1199.48 0.8
1241.17 16.8
1241.49 17.2
1241.93 0.3
1242.46 1.1
1244.38 0.3
1259.06 2.3
1259.53 3.7
1302.15 2.3
1302.59 3.2

There are 7 similar spectra:

Id Structure Score

4823

0.78

5467

0.76

4820

0.74

5471

0.73

5470

0.63

5469

0.63

4821

0.59

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1300.51
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

Report errors in this entry

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