Structure

    redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
178.98 12.6

Annotations:

C b1D-GlcNAc,p/#ccleavage--4b1D-Gal,p$MONO,Und,-H,0,redEnd
179.79 0.0
180.34 0.2
185.77 0.3
200.99 0.6
201.55 0.0
204.09 9.5

Annotations:

Z redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
204.88 0.0
218.88 0.4
219.44 0.0
220.82 0.5

Annotations:

^{2,4}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_2_4--4b1D-Gal,p$MONO,Und,-H,0,redEnd
221.21 0.2
221.74 1.0
222.05 1.1

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
222.62 0.0
242.02 0.3
246.04 0.4
246.61 0.0
248.24 0.8
248.78 0.0
262.6 0.6
263.19 0.0
269.14 0.5
269.7 0.0
281.05 0.4

Annotations:

^{0,2}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_0_2--4b1D-Gal,p$MONO,Und,-H,0,redEnd
281.61 0.0
285.85 0.3
323.21 0.3
325.01 0.4
325.54 0.0
328.05 1.2
328.61 0.0
330.3 1.2
330.86 0.0
335.85 0.8
336.41 0.0
346.96 0.5
347.3 0.9
347.86 0.0
351.16 0.6
351.7 0.0
355.19 0.4
355.74 0.0
356.16 1.0
356.87 0.5
357.44 0.0
364.03 8.3

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
364.77 0.0
368.97 0.3
382.13 0.4

Annotations:

C ?1D-GalNAc,p/#ccleavage--3b1D-GlcNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
382.69 0.0
383.06 0.4
383.61 0.0
384.14 0.8
384.71 0.0
406.92 5.3
407.22 7.5

Annotations:

Z redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
407.9 0.0
413.93 0.6
414.39 0.3
415.05 0.6
415.61 0.0
424.96 1.0

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
425.52 0.0
427.12 0.7
427.67 0.0
432.03 0.4
432.57 0.0
436.12 0.8
436.69 0.0
455.06 0.4
455.61 0.0
470.95 0.2
472.14 1.0
472.69 0.0
474.33 1.5
474.88 0.0
478.57 0.3
478.88 0.5
479.28 7.6
479.97 0.0
482.96 0.4
483.52 0.0
484.99 1.1
485.52 0.0
515.23 0.2
526.32 1.0
526.87 0.0
527.37 2.3
528.1 0.0
542.2 0.3
542.67 0.3
545.04 2.1
545.39 0.5
545.96 0.0
550.25 0.5
550.98 0.6
551.53 0.0
569.22 0.6
569.78 0.0

There are 19 similar spectra:

Id Structure Score

1.00

3742

0.93

5695

0.93

5547

0.92

4230

0.90

5222

0.90

3869

0.90

7978

0.88

5935

0.86

5015

0.77

5195

0.75

6700

0.71

3743

0.68

6701

0.66

4231

0.64

5223

0.64

5509

0.62

7700

0.56

5694

0.54

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 586.24
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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