Structure

    redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p--4?1HexNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
279.89 1.2
280.45 0.0
298.92 0.9
299.47 0.0
317.08 0.8
342.09 0.6
364.13 3.6

Annotations:

B ?1D-Gal,p/#bcleavage--4?1HexNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd BY ?1D-GalNAc,p/#bcleavage--3b1D-GlcNAc,p--??1D-Gal,p--4?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3b1D-GlcNAc,p--??1D-Gal,p--4?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd BY b1D-GlcNAc,p/#bcleavage--??1D-Gal,p--4?1HexNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd CZ b1D-GlcNAc,p/#ccleavage--??1D-Gal,p--4?1HexNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
364.7 0.0
366.23 0.7
388.81 0.7
407.09 0.6

Annotations:

Z redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
425.1 7.0

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
425.33 2.8

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
425.91 0.0
426.95 1.3
427.49 0.0
438.39 1.2
438.95 0.0
461.24 0.9
461.79 0.0
479.33 1.6
479.87 0.0
485.18 1.7
485.43 0.6
490.0 0.8
496.88 2.3
497.44 0.0
526.58 1.1

Annotations:

B b1D-GlcNAc,p/#bcleavage--??1D-Gal,p--4?1HexNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
527.08 17.3

Annotations:

^{2,4}X_{Gal} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
527.45 3.5
528.2 0.6
545.31 1.9
545.92 1.8
546.47 0.0
548.81 0.9

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3b1D-GlcNAc,p--??1D-Gal,p--4?1HexNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
549.41 0.9
550.14 0.7
567.38 1.0

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3b1D-GlcNAc,p--??1D-Gal,p--4?1HexNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3b1D-GlcNAc,p--??1D-Gal,p--4?1HexNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
567.94 0.0
569.09 2.7

Annotations:

Z redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p--4?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
569.69 0.0
570.03 1.7
570.58 0.0
587.19 21.1

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p--4?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
588.0 4.1
588.61 0.0
605.53 0.4
646.45 1.8
647.02 0.0
661.21 0.6
665.3 0.9
670.38 0.9

Annotations:

^{0,2}X_{HexNAc} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p--4?1HexNAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
692.77 1.0
712.19 4.5
712.76 2.2
713.21 1.8
713.78 0.0
729.32 12.4

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-GlcNAc,p--??1D-Gal,p--4?1HexNAc,p--4b1D-Gal,p$MONO,Und,-H,0,redEnd
730.06 6.4

Annotations:

^{2,4}X_{HexNAc} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p--4?1HexNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
730.69 0.0
748.18 0.4
748.51 3.6
749.06 0.0
754.09 0.8
754.63 0.0
771.79 1.9
772.29 21.7

Annotations:

Z redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p--4?1HexNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
773.01 3.4
773.29 2.1
784.3 0.7
790.28 8.4

Annotations:

Y redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p--4?1HexNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
791.3 1.9
791.9 0.8
802.02 2.5
802.58 0.0
806.77 1.1
807.31 0.0
832.23 2.6

Annotations:

^{0,2}X_{Gal} redEnd--??1D-GalNAc,p--3b1D-GlcNAc,p--??1D-Gal,p--4?1HexNAc,p--4b1D-Gal,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
832.85 0.0
833.45 3.9
834.03 0.0
844.09 3.9
844.61 1.4
845.16 0.0
850.07 1.5
850.63 0.0
850.97 0.8
851.44 0.8
851.97 0.0
892.29 54.5
893.33 26.5
894.03 0.0
910.3 11.4
910.62 4.8
911.31 7.3
911.82 1.0
912.37 0.0
916.13 1.8
916.69 0.0
1436.19 0.6

There are 12 similar spectra:

Id Structure Score

1.00

5733

0.97

8010

0.74

8009

0.72

8011

0.72

7735

0.65

7734

0.65

5206

0.54

5584

0.54

5734

0.53

7412

0.52

7441

0.52

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 951.37
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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