Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
347.0 0.6
359.04 0.4
364.07 0.5

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
365.02 1.2
366.22 0.4

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#zcleavage)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
370.87 0.6
383.3 0.4
389.21 5.6

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
390.0 0.9
390.29 0.6
407.04 2.6

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
408.01 0.8
424.17 2.9

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_4--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
425.22 2.5

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
425.48 0.4
437.84 0.5
466.46 0.4
479.04 1.4
509.22 2.3
510.29 0.5
521.4 1.0
527.24 2.1

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_0_4--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd ^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
528.01 2.4
528.28 0.9
538.23 0.4
541.95 0.6
549.97 1.1
551.71 0.5
568.15 0.4
569.16 114.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
570.17 22.8
584.94 0.4
587.17 16.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
588.33 3.7
592.11 1.4
594.09 0.5
609.89 0.4
648.0 0.7
649.2 1.1
656.28 0.3
662.25 0.7
664.14 0.4
688.17 0.3
701.45 0.8
712.17 1.9
712.45 0.3
718.07 0.6
719.14 0.7
721.16 0.7
724.6 0.9
730.24 8.1
730.7 0.3
731.11 0.9

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
733.99 0.4
734.35 0.3
736.19 0.8
736.39 0.3
748.06 0.5
748.25 0.5
754.6 0.4
755.24 0.7
761.21 1.8
772.16 26.4

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
773.27 5.8
774.1 1.1
779.28 0.3
780.37 0.5
781.37 0.8
789.82 2.0
790.05 2.7
790.41 5.8

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
790.83 0.5
791.28 1.1
791.52 1.1
798.2 1.5
811.32 0.6
833.29 0.3
845.1 1.5
850.05 0.3
853.4 0.4
854.21 0.7
860.11 0.5
874.24 0.8
875.3 0.9
877.32 0.4
885.3 0.5
888.45 1.2
892.42 8.0
893.53 2.8
907.48 1.7
908.81 0.4
909.6 0.4
909.96 0.4
910.35 4.9
911.28 1.4
922.76 1.0
1358.41 0.8
1505.27 0.6
1829.37 0.5

There are 8 similar spectra:

Id Structure Score

3761

0.96

5795

0.94

7736

0.85

7898

0.84

3891

0.82

4267

0.82

3760

0.79

5585

0.77

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 951.37
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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