Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p)--??1D-GlcNAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
406.96 0.9
407.56 1.0

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
408.11 0.0
408.64 0.0
425.04 0.9

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
425.61 0.0
503.79 0.9
504.36 0.0
527.24 1.2
527.78 0.0
528.32 0.0
554.18 0.7
554.74 0.0
569.31 1.0

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
569.87 0.0
586.33 6.4

Annotations:

^{0,4}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p)--??1HexNAc,p/#ycleavage@360$MONO,Und,-H,0,redEnd
587.14 2.7

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
587.68 1.3
588.19 0.9
588.78 0.0
628.48 0.8
629.03 0.0
672.26 1.0
672.81 0.0
716.41 1.5
716.96 0.0
717.52 0.0
729.33 1.2

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p)--??1HexNAc,p@360$MONO,Und,-H,0,redEnd
729.88 0.0
730.44 2.1

Annotations:

^{2,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p/#ycleavage)--??1HexNAc,p@360$MONO,Und,-H,0,redEnd
731.3 0.8

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p/#ycleavage)--??1HexNAc,p/#zcleavage@360$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p/#zcleavage)--??1HexNAc,p/#ycleavage@360$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p)--??1HexNAc,p/#zcleavage@360$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p)--??1HexNAc,p/#ycleavage@360$MONO,Und,-H,0,redEnd
731.86 0.0
746.99 0.9

Annotations:

C ?1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p)--??1HexNAc,p@360$MONO,Und,-H,0,redEnd
747.54 0.0
749.56 1.6

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p/#ycleavage)--??1HexNAc,p/#ycleavage@360$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p)--??1HexNAc,p/#ycleavage@360$MONO,Und,-H,0,redEnd
750.13 0.0
750.69 0.0
789.1 0.8

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p)--??1HexNAc,p@360$MONO,Und,-H,0,redEnd
789.65 0.0
790.16 1.7

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p/#ycleavage)--??1HexNAc,p@360$MONO,Und,-H,0,redEnd
790.72 0.0
791.32 1.2
791.87 0.0
831.18 1.3
831.73 0.0
832.28 0.0
861.21 1.3
861.77 0.0
862.29 0.0
870.28 0.9
870.85 0.0
871.37 0.0
878.44 0.9
878.98 0.0
892.41 1.1

Annotations:

^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p)--??1HexNAc,p@360$MONO,Und,-H,0,redEnd
892.96 0.0
893.54 0.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p)--??1HexNAc,p/#zcleavage@360$MONO,Und,-H,0,redEnd
894.11 0.0
897.65 0.9
898.2 0.0
906.22 0.8
906.78 0.0
910.04 0.4
910.61 0.0
911.35 6.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p)--??1HexNAc,p/#ycleavage@360$MONO,Und,-H,0,redEnd
911.77 0.8
912.16 0.9
912.71 0.0
916.63 0.7
917.19 0.0
932.13 0.8
932.7 0.0
934.44 21.7

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p/#zcleavage)--??1HexNAc,p@360$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p)--??1HexNAc,p@360$MONO,Und,-H,0,redEnd
935.34 1.0
935.87 0.0
945.74 1.2
946.29 0.0
952.25 8.5
952.57 11.7

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p/#ycleavage)--??1HexNAc,p@360$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--??1D-Gal,p(--??1D-Gal,p)--??1HexNAc,p@360$MONO,Und,-H,0,redEnd
953.18 1.2
953.63 0.9
954.19 0.0
1022.92 1.2
1023.48 0.0
1024.03 0.0
1054.29 3.9
1054.52 3.5
1054.75 1.1
1055.61 0.6
1056.19 0.0
1069.2 2.1
1069.77 0.0
1070.29 0.0
1072.39 6.4
1072.77 1.5
1073.34 2.6
1074.02 0.0
1079.48 1.8
1080.03 0.0
1080.57 0.0

There are 6 similar spectra:

Id Structure Score

1.00

7231

0.75

3904

0.75

3986

0.53

3903

0.53

5748

0.52

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1113.42
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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