Structure

    redEnd--??1D-GalNAc(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p$MONO,Und,-H,0,redEnd

Integrated O-glycomic and proteomic signatures of spontaneous and butyrate-stimulated colorectal cancer cell line differentiation

GlyTouCan Accession Number: Loading...

Peak Intensity
407.13 357.0

Annotations:

YZ redEnd--??1D-GalNAc(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
424.13 181.0

Annotations:

^{1,3}A_{Gal} b1D-Gal,p/#acleavage_1_3--3b1D-GlcNAc,p--?b1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,4}A_{Gal} b1D-Gal,p/#acleavage_2_4--3b1D-GlcNAc,p--?b1D-Gal,p$MONO,Und,-H,0,redEnd
468.1 115.0

Annotations:

^{2,5}A_{Gal} b1D-Gal,p/#acleavage_2_5--3b1D-GlcNAc,p--?b1D-Gal,p$MONO,Und,-H,0,redEnd
484.19 117.0

Annotations:

^{0,2}A_{Gal} b1D-Gal,p/#acleavage_0_2--3b1D-GlcNAc,p--?b1D-Gal,p$MONO,Und,-H,0,redEnd ^{0,2}A_{GlcNAc}Y b1D-GlcNAc,p/#acleavage_0_2--4b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
569.18 2971.0

Annotations:

Z redEnd--??1D-GalNAc(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--3b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--3b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
586.27 394.0

Annotations:

^{2,4}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_2_4--4b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p$MONO,Und,-H,0,redEnd
587.14 1096.0

Annotations:

Y redEnd--??1D-GalNAc(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--3b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
731.29 513.0

Annotations:

Z redEnd--??1D-GalNAc(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p--3b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
749.26 1046.0

Annotations:

Y redEnd--??1D-GalNAc(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p--3b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
754.24 853.0

Annotations:

ZZ redEnd--??1D-GalNAc(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
772.3 222.0

Annotations:

YZ redEnd--??1D-GalNAc(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
790.3 220.0

Annotations:

YY redEnd--??1D-GalNAc(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
934.32 8019.0

Annotations:

Z redEnd--??1D-GalNAc(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p$MONO,Und,-H,0,redEnd
952.34 3554.0

Annotations:

Y redEnd--??1D-GalNAc(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p$MONO,Und,-H,0,redEnd

There are 4 similar spectra:

Id Structure Score

4889

0.75

0.75

5748

0.53

3987

0.52

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1113.42
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

N/A

HPLC

Column Hypercarb

Method

  • 73min gradient with 0,6ul/min run rate
  • 10mM ammonium bicarbonate
  • 60% ACN, 10mM ammonium bicarbonate

Mass Spec

Bruker Daltonik amaZon Speed ETD ETD

MIRAGE Structural data

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