Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
407.05 2.7

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4?1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
408.17 0.6
425.07 0.5

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
450.14 1.0
471.43 0.4
503.47 0.7
509.1 0.4

Annotations:

Z^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4?1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
527.28 1.2

Annotations:

Y^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4?1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
586.4 6.4

Annotations:

^{2,4}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_2_4--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
587.22 6.5

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
588.19 0.6
628.14 3.7
628.4 1.3
646.19 1.3

Annotations:

^{0,2}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_0_2--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
671.42 1.0

Annotations:

^{2,4}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
690.33 0.5
707.13 0.6
713.31 0.9

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
729.23 2.2

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
730.3 1.0
731.25 7.7

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
731.53 4.4
732.12 0.7
732.48 0.4
732.82 0.6
749.24 3.0

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
749.42 2.9
789.29 3.3

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
809.41 0.5
831.15 0.8
833.26 0.4
850.29 1.7
851.06 0.5
855.52 0.7
856.31 0.5
869.24 1.2
869.53 0.5
888.05 0.5
892.38 9.4

Annotations:

^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
893.37 5.5
900.51 0.5
910.36 3.6
910.81 1.1
911.55 9.3
912.33 5.0
916.34 0.4

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
934.37 43.2

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
935.33 11.0
936.03 0.5
952.4 19.1

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
953.4 6.8
1012.02 0.4
1022.53 0.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
1034.42 0.4
1054.42 11.6

Annotations:

^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
1055.47 4.7
1059.06 0.4
1072.4 8.6
1073.28 2.2
1073.53 1.2
1078.43 0.6
1095.86 0.4
1096.52 4.0

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
1097.04 0.6
1097.43 0.8
1106.62 0.5
1114.43 120.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
1115.45 37.4
1116.14 1.1
1143.52 0.4
1167.38 0.6
1179.55 0.7
1184.13 0.6
1190.98 0.6
1207.53 0.6
1207.77 0.5
1223.43 1.1
1224.38 0.7
1231.51 0.5
1241.75 0.7
1242.41 0.6
1243.25 1.3
1243.72 1.4

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--4?1D-Gal,p--??1HexNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
1244.56 2.4
1250.42 0.5
1269.76 0.5
1276.5 0.9
1286.68 0.8
1301.06 0.8
1309.53 0.5
1327.58 5.1
1328.43 2.4
1328.66 1.0
1345.64 7.3
1346.33 1.4
1346.73 2.3
1354.62 0.6
1359.17 0.5
1365.57 0.6
1373.67 0.6

There are 4 similar spectra:

Id Structure Score

1.00

7233

0.91

3525

0.91

4284

0.77

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1404.52
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

Report errors in this entry

UniCarb-DR Creative Commons License

Supported by SIB ExPASy  |  JST / NBDCDICP