Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--?b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p}--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Integrated O-glycomic and proteomic signatures of spontaneous and butyrate-stimulated colorectal cancer cell line differentiation

GlyTouCan Accession Number: Loading...

Peak Intensity
772.24 221.0

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--?b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--?b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
934.35 296.0

Annotations:

ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--?b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--?b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p$MONO,Und,-H,0,redEnd
952.32 354.0

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--?b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--?b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p$MONO,Und,-H,0,redEnd
1096.31 135.0

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--?b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p$MONO,Und,-H,0,redEnd
1114.33 1430.0

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--?b1D-Gal,p--3b1D-GlcNAc,p--?b1D-Gal,p$MONO,Und,-H,0,redEnd

There are 6 similar spectra:

Id Structure Score

5405

0.94

0.94

3525

0.92

4918

0.91

0.91

4284

0.73

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1404.52
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

N/A

HPLC

Column Hypercarb

Method

  • 73min gradient with 0,6ul/min run rate
  • 10mM ammonium bicarbonate
  • 60% ACN, 10mM ammonium bicarbonate

Mass Spec

Bruker Daltonik amaZon Speed ETD ETD

MIRAGE Structural data

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