Structure

    redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6b1D-GlcNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
424.11 6.3

Annotations:

^{0,4}A_{GalNAc} a1D-GalNAc,p/#acleavage_0_4--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
424.7 0.0
425.27 0.0
443.2 1.5
443.77 0.0
477.24 2.6
477.79 0.0
494.77 1.0
495.26 18.8

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
495.94 0.0
496.46 0.0
540.3 4.0

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
540.86 2.0
541.44 0.0
541.95 0.0
548.9 0.9

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd
549.45 0.0
579.71 5.6
580.27 0.0
580.79 0.0
620.87 2.7
621.42 30.7

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
621.82 7.9
622.28 2.5
622.8 0.0
623.36 0.0
633.34 2.9
633.89 0.0
634.44 0.0
660.09 1.5
660.72 2.3
661.28 0.0
669.05 11.8
669.46 3.1
670.03 0.0
670.55 0.0
684.67 1.7
685.21 0.0
689.74 24.1

Annotations:

^{1,3}X_{GalNAc}Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#xcleavage_1_3--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
690.38 0.0
690.94 0.0
715.67 1.6
716.22 0.0

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
731.17 0.9

Annotations:

CY ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
731.71 0.0
752.16 1.9
752.71 0.0
753.88 1.3

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
754.44 0.0
766.97 1.3
767.53 0.0
951.94 1.9

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
952.52 0.0
955.49 4.0
956.04 0.0
956.6 0.0
1028.68 3.6
1029.25 0.0
1029.78 0.0
1063.41 2.1

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1063.99 0.0
1064.58 5.2
1065.19 0.0
1065.71 0.0
1081.46 4.3

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1082.06 0.0
1082.56 3.4
1083.11 0.0
1083.64 0.0
1183.49 3.6
1184.07 0.0
1184.61 0.0
1209.46 1.7

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1210.02 0.0
1225.45 2.2

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1226.0 0.0
1226.53 0.0
1227.07 1.9
1227.84 8.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1228.44 0.0
1228.96 0.0
1243.43 9.4

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1243.72 8.3
1244.39 23.8
1244.76 6.0
1245.44 0.0
1301.72 1.8

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
1302.27 0.0
1369.32 3.3
1369.87 0.0
1370.44 0.0
1413.58 1.3
1414.13 0.0
1428.44 8.8

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1429.03 0.0
1429.44 1.9
1430.0 0.0
1430.65 1.6

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1431.19 0.0
1431.72 0.0

There are 3 similar spectra:

Id Structure Score

5488

0.72

4931

0.71

4932

0.61

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1591.60
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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