Structure

    redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6b1D-GlcNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
345.73 0.8

Annotations:

BZ a1D-GalNAc,p/#bcleavage--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
346.28 0.0
348.31 3.7

Annotations:

B ?1D-Gal,p/#bcleavage--??1HexNAc,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
348.88 0.0
406.06 0.5

Annotations:

^{2,4}A_{GalNAc}Z a1D-GalNAc,p/#acleavage_2_4--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
411.0 1.1
411.54 0.0
424.16 1.1

Annotations:

^{0,4}A_{GalNAc} a1D-GalNAc,p/#acleavage_0_4--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,4}A_{GalNAc}Y a1D-GalNAc,p/#acleavage_2_4--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd
487.09 1.2

Annotations:

^{2,4}A_{GalNAc}Z ?1D-GalNAc,p/#acleavage_2_4--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p$MONO,Und,-2H,0,redEnd
487.64 0.0
494.93 0.9
495.27 2.9

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
495.94 0.0
504.92 0.7
505.47 0.0
531.3 0.7

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
540.32 1.7

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
540.89 0.0
571.37 0.8
571.94 0.0
580.23 1.1
580.78 0.0
600.32 3.4
600.73 3.1
601.32 0.0
601.81 1.0
602.36 0.0
611.99 3.7

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
612.69 0.9
612.95 1.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
613.51 0.0
621.28 26.0

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
621.8 9.1
622.25 2.6
622.82 0.0
635.98 1.3
636.53 0.0
659.51 1.9
660.07 0.0
660.57 1.5
661.12 0.0
662.82 0.7
663.37 0.0
668.73 2.0
669.29 0.0
669.93 1.3
670.48 0.0
689.69 7.3
690.22 7.3
690.9 0.0
695.74 1.7

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
696.28 0.0
704.85 1.6
705.4 0.0
714.29 1.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p)--6?1HexNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
714.86 0.0
722.78 4.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p--??1L-Fuc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-2H,0,redEnd
723.62 3.3
724.2 0.0
836.45 1.1
837.0 0.0
860.15 2.4

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
860.71 0.0
901.32 0.8

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
901.87 0.0
922.22 0.9
922.78 0.0
952.37 1.0

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
952.94 0.0
1039.6 1.5
1040.17 0.0
1046.68 1.5
1047.22 0.0
1063.53 1.4

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1064.03 1.1
1064.43 3.2
1065.1 0.0
1081.25 4.1
1081.59 4.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1082.55 1.7
1083.14 0.9
1083.7 0.0
1160.49 1.6
1161.04 0.0
1183.53 0.7
1202.59 0.9
1203.14 0.0
1225.58 1.5

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#zcleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1225.96 0.0
1226.18 0.0
1243.52 24.3

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p--??1HexNAc,p/#ycleavage)--6?1HexNAc,p--??1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1244.7 7.9
1245.04 2.1
1245.32 1.6
1245.66 1.6
1246.21 0.0
1303.76 0.7
1304.31 0.0
1338.37 0.9
1338.94 0.0

There are 7 similar spectra:

Id Structure Score

1.00

5488

0.89

4931

0.83

0.83

5765

0.71

4930

0.61

0.61

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1591.60
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

Report errors in this entry

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