Structure

    redEnd--?a1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--??1D-Gal,p--3a2D-NeuAc,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd

Integrated O-glycomic and proteomic signatures of spontaneous and butyrate-stimulated colorectal cancer cell line differentiation

GlyTouCan Accession Number: Loading...

Peak Intensity
371.08 131.0

Annotations:

ZZZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
383.98 373.0

Annotations:

Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
535.13 290.0

Annotations:

ZZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
551.18 261.0

Annotations:

ZZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd YZZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#zcleavage)--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
570.19 150.0

Annotations:

^{0,4}A_{GalNAc}Y a1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
673.11 131.0

Annotations:

CY a1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p(--??1D-Gal,p--??2D-NeuAc,p)--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd
713.06 383.0

Annotations:

ZZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#zcleavage)--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
715.22 537.0

Annotations:

^{0,4}A_{GalNAc}Y a1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p(--??1D-Gal,p--??2D-NeuAc,p)--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd YZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd ZY redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
715.35 151.0

Annotations:

Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--??1D-Gal,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd YZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd ZY redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
733.27 3019.0

Annotations:

Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--??1D-Gal,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd YY redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
877.23 185.0

Annotations:

Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#zcleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
891.32 368.0

Annotations:

^{0,3}A_{GalNAc} a1D-GalNAc,p/#acleavage_0_3--6b1D-GlcNAc,p(--??1D-Gal,p--??2D-NeuAc,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
895.27 11667.0

Annotations:

Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p(--??1D-Gal,p--??2D-NeuAc,p/#ycleavage)--??1L-Fuc,p$MONO,Und,-H,0,redEnd
1006.45 137.0

Annotations:

Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p(--??1D-Gal,p--??2D-NeuAc,p)--??1L-Fuc,p$MONO,Und,-H,0,redEnd

There are 24 similar spectra:

Id Structure Score

5826

0.96

7220

0.95

4254

0.94

5246

0.94

7221

0.94

3516

0.90

5827

0.87

4275

0.85

5828

0.84

0.84

4274

0.82

3989

0.81

5825

0.81

4253

0.71

5245

0.71

3990

0.68

0.68

7659

0.68

7675

0.68

4276

0.67

5829

0.66

3152

0.62

5615

0.61

3908

0.54

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1185.44
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

N/A

HPLC

Column Hypercarb

Method

  • 73min gradient with 0,6ul/min run rate
  • 10mM ammonium bicarbonate
  • 60% ACN, 10mM ammonium bicarbonate

Mass Spec

Bruker Daltonik amaZon Speed ETD ETD

MIRAGE Structural data

Report errors in this entry

UniCarb-DR Creative Commons License

Supported by SIB ExPASy  |  JST / NBDCDICP