Structure

    redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p@270s$MONO,Und,-H,0,redEnd

Integrated O-glycomic and proteomic signatures of spontaneous and butyrate-stimulated colorectal cancer cell line differentiation

GlyTouCan Accession Number: Loading...

Peak Intensity
407.12 220.0

Annotations:

YZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
510.03 183.0

Annotations:

B a1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p@270s$MONO,Und,-H,0,redEnd
551.21 302.0

Annotations:

ZZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#zcleavage@270s$MONO,Und,-H,0,redEnd
569.27 510.0

Annotations:

YZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd YZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#zcleavage@270s$MONO,Und,-H,0,redEnd ZY redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#ycleavage@270s$MONO,Und,-H,0,redEnd
570.28 117.0

Annotations:

^{0,4}A_{GalNAc} a1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p@270s$MONO,Und,-H,0,redEnd
715.27 3973.0

Annotations:

Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p@270s$MONO,Und,-H,0,redEnd
731.18 128.0

Annotations:

YZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#zcleavage@270s$MONO,Und,-H,0,redEnd ZY redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#ycleavage@270s$MONO,Und,-H,0,redEnd
733.29 2082.0

Annotations:

Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p@270s$MONO,Und,-H,0,redEnd
877.35 113.0

Annotations:

Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p@270s$MONO,Und,-H,0,redEnd
895.32 11288.0

Annotations:

Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p@270s$MONO,Und,-H,0,redEnd

There are 24 similar spectra:

Id Structure Score

7219

0.95

7221

0.93

5826

0.93

3909

0.92

4254

0.91

5246

0.91

5827

0.91

3516

0.90

4275

0.90

5828

0.86

0.83

3989

0.79

5825

0.78

4274

0.75

3990

0.74

0.67

7659

0.67

7675

0.67

5829

0.66

4276

0.66

5615

0.66

4253

0.64

5245

0.64

3152

0.61

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1185.44
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

N/A

HPLC

Column Hypercarb

Method

  • 73min gradient with 0,6ul/min run rate
  • 10mM ammonium bicarbonate
  • 60% ACN, 10mM ammonium bicarbonate

Mass Spec

Bruker Daltonik amaZon Speed ETD ETD

MIRAGE Structural data

Report errors in this entry

UniCarb-DR Creative Commons License

Supported by SIB ExPASy  |  JST / NBDCDICP