Structure

    redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p(--?a1L-Fuc,p@450)--?b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-2H,0,redEnd

Integrated O-glycomic and proteomic signatures of spontaneous and butyrate-stimulated colorectal cancer cell line differentiation

GlyTouCan Accession Number: Loading...

Peak Intensity
290.1 1532.0

Annotations:

B b1D-Gal,p/#bcleavage--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
510.13 205.0

Annotations:

CZ a1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p(--?a1L-Fuc,p@450)--?b1D-Gal,p--3a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd BY a1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p(--?a1L-Fuc,p@450)--?b1D-Gal,p--3a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
570.12 126.0

Annotations:

^{0,4}A_{GalNAc}Y a1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p(--?a1L-Fuc,p@450)--?b1D-Gal,p--3a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
628.25 204.0

Annotations:

C^{0,3}X_{NeuAc} a1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p(--?a1L-Fuc,p@450)--?b1D-Gal,p--3a2D-NeuAc,p/#xcleavage_0_3$MONO,Und,-H,0,redEnd
695.14 126.0

Annotations:

ZZZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p(--?a1L-Fuc,p/#zcleavage@450)--?b1D-Gal,p--3a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
729.27 491.0

Annotations:

^{3,5}A_{GalNAc}Y a1D-GalNAc,p/#acleavage_3_5--6b1D-GlcNAc,p(--?a1L-Fuc,p/#ycleavage@450)--?b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd C^{1,4}X_{Fuc} a1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p(--?a1L-Fuc,p/#xcleavage_1_4@450)--?b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
842.16 172.0

Annotations:

ZZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p(--?a1L-Fuc,p/#zcleavage@450)--?b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZZ redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p(--?a1L-Fuc,p/#zcleavage@450)--?b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
895.29 280.0

Annotations:

YY redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p(--?a1L-Fuc,p@450)--?b1D-Gal,p--3a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
1168.34 236.0

Annotations:

Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p(--?a1L-Fuc,p@450)--?b1D-Gal,p--3a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#zcleavage)--6b1D-GlcNAc,p(--?a1L-Fuc,p@450)--?b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1186.44 3832.0

Annotations:

Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p(--?a1L-Fuc,p@450)--?b1D-Gal,p--3a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6b1D-GlcNAc,p(--?a1L-Fuc,p@450)--?b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd
1313.44 255.0

Annotations:

Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--3a2D-NeuAc,p)--6b1D-GlcNAc,p(--?a1L-Fuc,p/#zcleavage@450)--?b1D-Gal,p--3a2D-NeuAc,p$MONO,Und,-H,0,redEnd

There are 7 similar spectra:

Id Structure Score

4256

0.88

5256

0.88

7661

0.87

7677

0.87

0.87

3800

0.68

7968

0.66

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1476.54
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

N/A

HPLC

Column Hypercarb

Method

  • 73min gradient with 0,6ul/min run rate
  • 10mM ammonium bicarbonate
  • 60% ACN, 10mM ammonium bicarbonate

Mass Spec

Bruker Daltonik amaZon Speed ETD ETD

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