Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd

An E-workflow for implementing guidelines in glycomics mass spectrometry

GlyTouCan Accession Number: Loading...

Peak Intensity
240.98 8.4

Annotations:

B b1D-GlcNAc,p/#bcleavage--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
242.27 0.4
258.87 1.0

Annotations:

C b1D-GlcNAc,p/#ccleavage--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
262.39 0.5

Annotations:

^{0,4}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{1,3}A_{GalNAc} ?1D-GalNAc,p/#acleavage_1_3--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,5}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_5)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
263.15 1.0
299.04 0.3
301.03 1.8

Annotations:

^{2,4}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_2_4--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
302.13 0.6
315.15 3.1

Annotations:

^{3,5}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_3_5--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
316.13 1.6
343.25 2.4
361.07 2.0

Annotations:

^{0,2}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_0_2--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
365.03 1.3

Annotations:

Y^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
365.86 1.8

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
366.3 0.7

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
366.91 0.5
368.06 0.9
371.95 1.2

Annotations:

^{1,4}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_1_4--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
384.15 0.6

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
389.06 2.1

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
389.6 0.7

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
402.19 1.0
402.86 0.3
407.12 2.4

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
414.11 0.6
416.23 0.3

Annotations:

^{1,5}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_1_5--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
426.14 0.5
444.08 173.4

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
445.12 35.7
446.02 2.1
462.16 1.4

Annotations:

C ?1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
463.03 0.5
463.93 1.2
464.29 0.9
465.03 1.3

Annotations:

^{2,5}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_5)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
465.24 0.6

Annotations:

^{2,5}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_5)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
485.06 0.5
486.25 0.7
487.1 0.5
492.02 1.1
504.0 0.3

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
505.05 3.4
505.37 3.8
506.23 0.9
509.14 0.9

Annotations:

^{0,4}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_0_4)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_3)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
522.26 1.2
526.92 0.8

Annotations:

^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{0,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_0_4)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_3)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
527.44 0.4

Annotations:

^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{0,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_0_4)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_3)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal}Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
527.9 0.9
534.11 1.5

Annotations:

^{0,3}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_3--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
537.23 0.9
548.09 0.9
551.21 1.0
561.97 0.8
563.94 0.6
569.26 2.1

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S/#lcleavage$MONO,Und,-H,0,redEnd
587.22 0.4

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S/#lcleavage$MONO,Und,-H,0,redEnd
589.17 5.6
589.89 0.8
590.29 1.9
606.06 0.5
607.15 4.7
608.12 2.2
624.92 4.5
625.93 0.7
628.85 0.4

Annotations:

^{0,2}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_0_2)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S/#lcleavage$MONO,Und,-H,0,redEnd
631.37 1.8
632.34 0.4
644.13 0.6
648.19 0.9
649.17 13.7

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
649.76 1.7
650.22 4.3
665.22 1.5
667.16 463.3

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
668.18 86.1
668.97 1.4
669.27 4.0
672.36 0.7
682.31 0.8
690.16 0.4
695.86 2.0
696.47 0.4
710.23 3.8

Annotations:

^{2,5}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_5(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
711.2 4.6
725.67 0.4

Annotations:

^{2,5}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_5)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
731.17 0.6
732.09 0.6
733.09 0.5
739.15 0.5

Annotations:

^{0,3}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_0_3)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd ^{1,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_4)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
745.14 0.5
749.34 1.4

Annotations:

redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S/#lcleavage$MONO,Und,-H,0,redEnd
752.09 0.5
754.21 0.7
762.16 1.0
768.95 1.0

Annotations:

^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_0_4)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_3)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
769.33 5.0

Annotations:

^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_0_4)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_1_3)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#xcleavage_2_4)--6b1D-GlcNAc,p--4b1D-Gal,p--??1S$MONO,Und,-H,0,redEnd
770.19 1.7
783.8 0.9
787.24 0.7
788.03 1.3
788.4 1.9
791.07 1.0
792.49 2.2
797.03 1.1
798.34 0.5
798.84 2.0
802.54 0.8
810.35 1.1
1339.87 1.4

There are 21 similar spectra:

Id Structure Score

1.00

6652

0.99

0.99

6686

0.99

0.99

5783

0.99

0.98

3122

0.94

3499

0.94

6651

0.94

0.94

5568

0.93

5392

0.93

0.93

0.93

6689

0.92

0.92

6682

0.92

0.92

6727

0.75

5784

0.52

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 828.25
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Bos Taurus
Tissue - Cervix Mucus

HPLC

Column NA

Method

  • 78 min gradient with Approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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