Structure

    redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd

An E-workflow for implementing guidelines in glycomics mass spectrometry

GlyTouCan Accession Number: Loading...

Peak Intensity
264.01 1.2

Annotations:

Y^{0,2}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#ycleavage)--3b1D-Gal,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
276.19 0.5

Annotations:

^{1,4}X_{GlcNAc}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#xcleavage_1_4)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ^{3,5}A_{GalNAc}Y ?1D-GalNAc,p/#acleavage_3_5--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Z^{0,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#zcleavage)--3b1D-Gal,p/#xcleavage_0_3$MONO,Und,-H,0,redEnd Z^{1,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#zcleavage)--3b1D-Gal,p/#xcleavage_1_4$MONO,Und,-H,0,redEnd
294.93 0.5
305.73 1.0

Annotations:

Z^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#zcleavage)--3b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Z^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#zcleavage)--3b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd Z^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#zcleavage)--3b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
305.95 2.2

Annotations:

Z^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#zcleavage)--3b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Z^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#zcleavage)--3b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd Z^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#zcleavage)--3b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
307.07 0.8

Annotations:

B b1D-GlcNAc,p/#bcleavage--4b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
325.27 0.8

Annotations:

C b1D-GlcNAc,p/#ccleavage--4b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
327.95 0.7
340.75 0.9
347.21 0.8

Annotations:

^{2,4}X_{GlcNAc}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#xcleavage_2_4)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
365.14 1.5

Annotations:

^{2,4}X_{GlcNAc}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#xcleavage_2_4)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
367.14 5.3

Annotations:

^{2,4}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_2_4--4b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
367.83 1.4
380.76 0.4

Annotations:

^{3,5}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_3_5--4b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
384.13 1.9

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#ycleavage)--3b1D-Gal,p$MONO,Und,-H,0,redEnd
389.13 8.0

Annotations:

ZZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
390.03 0.6
390.34 0.8
406.8 0.7

Annotations:

ZY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
407.31 3.8

Annotations:

ZY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
407.86 1.2
409.03 9.7
410.32 0.6

Annotations:

C^{1,5}X_{Fuc} ?1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#xcleavage_1_5$MONO,Und,-H,0,redEnd
423.39 1.2
425.16 0.6

Annotations:

YY redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
426.47 1.2
426.68 1.0

Annotations:

^{0,2}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_0_2--4b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
427.17 0.6

Annotations:

^{0,2}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_0_2--4b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
451.17 0.6
479.11 1.7

Annotations:

^{1,4}X_{Gal}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_4)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd Z^{0,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage)--3b1D-Gal,p/#xcleavage_0_3$MONO,Und,-H,0,redEnd Z^{1,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage)--3b1D-Gal,p/#xcleavage_1_4$MONO,Und,-H,0,redEnd
490.84 1.2
492.16 0.7
509.29 2.9

Annotations:

Z^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage)--3b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Z^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage)--3b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd Z^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage)--3b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_3)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
509.94 2.4

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
510.17 1.1

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
511.33 0.6
526.91 0.3

Annotations:

^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p/#xcleavage_2_4)--3b1D-Gal,p$MONO,Und,-H,0,redEnd Y^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage)--3b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Y^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage)--3b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd Y^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage)--3b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_3)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
535.05 1.0
551.08 3.2

Annotations:

ZZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
551.31 1.4

Annotations:

ZZ redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
560.97 0.6
569.22 13.0

Annotations:

Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage)--3b1D-Gal,p$MONO,Und,-H,0,redEnd
570.17 7.1

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
571.0 2.6
571.42 0.9
584.2 0.5

Annotations:

^{3,5}A_{GalNAc} ?1D-GalNAc,p/#acleavage_3_5--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p$MONO,Und,-H,0,redEnd
588.32 0.6
612.02 0.9

Annotations:

^{2,5}A_{GalNAc}Z ?1D-GalNAc,p/#acleavage_2_5(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--3b1D-Gal,p$MONO,Und,-H,0,redEnd
620.35 0.5
631.27 0.5
638.49 1.0
655.27 3.8

Annotations:

^{1,3}X_{Fuc}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#xcleavage_1_3)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Fuc}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_4)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
666.93 0.7
671.2 0.7

Annotations:

Z^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--3b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Z^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--3b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd Z^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--3b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{0,4}X_{Fuc}Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_4)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
672.68 2.2
673.21 15.7

Annotations:

^{1,3}X_{Fuc}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#xcleavage_1_3)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd ^{2,4}X_{Fuc}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_4)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
674.29 6.6
679.26 0.4
689.22 0.6

Annotations:

^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p/#xcleavage_1_3)--3b1D-Gal,p$MONO,Und,-H,0,redEnd Y^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--3b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd Y^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--3b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd Y^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--3b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{0,4}X_{Fuc}Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_4)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
691.47 1.0
695.64 0.5
697.06 0.8
697.29 1.9
715.22 107.1

Annotations:

Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p)--3b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
716.24 33.1
731.06 0.7

Annotations:

Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--3b1D-Gal,p$MONO,Und,-H,0,redEnd
731.43 1.2

Annotations:

Z redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#zcleavage)--3b1D-Gal,p$MONO,Und,-H,0,redEnd
733.22 32.4

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p)--3b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
734.18 10.2
734.67 0.7
735.71 1.5
739.75 0.9
749.37 1.1

Annotations:

Y redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#ycleavage)--3b1D-Gal,p$MONO,Und,-H,0,redEnd
750.03 1.7
751.2 0.8
763.95 0.4
772.05 1.0
775.14 1.1

Annotations:

^{0,2}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
776.25 0.8

Annotations:

^{2,5}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_5(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p)--3b1D-Gal,p$MONO,Und,-H,0,redEnd
783.75 0.5
786.57 1.2
814.63 1.0
815.25 1.0
832.04 0.7
835.26 6.4

Annotations:

^{1,3}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#xcleavage_1_3)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,4}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_4)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
835.6 4.0

Annotations:

^{1,3}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#xcleavage_1_3)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{2,4}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#xcleavage_2_4)--3b1D-Gal,p$MONO,Und,-H,0,redEnd ^{0,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_0_4$MONO,Und,-H,0,redEnd ^{1,3}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_1_3$MONO,Und,-H,0,redEnd ^{2,4}X_{Gal} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p)--3b1D-Gal,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd
836.33 2.4
848.05 0.6
851.18 1.9

Annotations:

^{0,4}X_{Fuc} redEnd--??1D-GalNAc,p(--6b1D-GlcNAc,p--4b1D-Gal,p--2a1L-Fuc,p/#xcleavage_0_4)--3b1D-Gal,p$MONO,Und,-H,0,redEnd
853.28 8.1
853.94 0.6
854.34 2.4
866.86 0.7
974.14 0.7
1023.1 1.1
1100.03 0.5
1156.74 1.0
1213.4 1.5
1283.32 1.1
1342.11 1.0
1462.24 0.7
1484.22 7.2
1484.78 0.7
1485.34 4.5
1485.57 1.0
1487.2 1.0
1522.21 0.7
1627.78 0.7
1639.41 0.9

There are 26 similar spectra:

Id Structure Score

5578

0.97

0.97

4865

0.97

0.95

7653

0.95

7669

0.95

0.95

6808

0.90

7224

0.89

3976

0.89

5791

0.87

3884

0.83

4265

0.81

5250

0.81

5180

0.77

7892

0.75

7223

0.74

0.73

7652

0.73

7668

0.73

5788

0.67

0.61

3759

0.59

3125

0.59

3975

0.51

5573

0.50

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 894.35
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Bos Taurus
Tissue - Cervix Mucus

HPLC

Column NA

Method

  • 78 min gradient with Approx 3-5 ul/min (static split from 250 ul/min) run rate
  • 10 mM (NH4)HCO3
  • 10 mM (NH4)HCO3 in 80% acetonitrile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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