Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
287.24 0.8
288.11 0.6
298.92 0.2
307.35 0.3

Annotations:

B b1D-GlcNAc,p/#bcleavage--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
324.69 0.6
325.11 0.7

Annotations:

C b1D-GlcNAc,p/#ccleavage--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
346.02 0.5

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
346.51 0.3
348.02 0.6
363.94 0.5

Annotations:

BY ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
364.72 0.4

Annotations:

^{2,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
366.79 0.6
367.34 0.9

Annotations:

^{2,4}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_2_4--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
383.12 0.3
385.18 1.2
389.07 4.7

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
389.36 2.1
390.36 1.0
392.87 0.4
393.14 0.3
407.0 1.3

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
407.33 0.7
407.82 0.2
408.2 0.7
409.1 2.1
410.04 0.7
427.13 0.4

Annotations:

^{0,2}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_0_2--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
431.95 0.3
444.92 0.8
451.12 0.3
469.29 0.3
495.15 0.7
509.14 2.4

Annotations:

^{2,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
510.16 1.1

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
510.45 0.5
528.98 0.3
534.08 0.3
535.8 0.2
547.41 0.3
549.91 0.5
551.27 0.3

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
552.15 1.6
565.34 0.4
569.19 6.5

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd
570.22 3.6

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
570.48 0.5
571.15 0.3
572.08 0.9
584.23 0.3
586.15 0.4
588.26 0.3
617.34 0.3
618.33 0.3
629.34 0.4
650.25 0.3
655.24 0.8
671.42 0.4
673.16 7.4

Annotations:

^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
673.57 0.3
674.3 1.0
677.09 0.4
677.98 0.5
679.04 0.8
679.24 0.3
691.43 0.9
697.13 0.3
705.35 0.4
714.21 0.3
715.22 36.1

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
716.3 9.6
721.99 0.6
723.07 0.6
723.35 1.2
724.14 0.8
731.37 1.4

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
732.21 0.6
733.16 8.3

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
734.16 2.6
734.53 0.8
735.41 0.2
790.8 0.2
798.02 0.4
798.94 0.3
803.17 0.3
804.08 0.5
821.05 0.5
821.51 0.4
833.11 0.3
833.69 0.4
834.23 0.3
835.38 3.3
836.28 3.6
847.16 0.4
851.28 0.4
853.35 2.6
853.69 0.4
854.22 1.7
854.47 2.8
859.39 0.3
861.16 0.5

There are 26 similar spectra:

Id Structure Score

1.00

3126

0.97

0.94

3976

0.90

5578

0.90

7224

0.89

6808

0.89

5791

0.88

0.88

7653

0.88

7669

0.88

3884

0.85

5180

0.81

4265

0.79

5250

0.79

7892

0.75

7223

0.70

0.70

0.70

5788

0.66

0.60

7652

0.60

7668

0.60

3759

0.58

0.57

3125

0.56

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 894.35
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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