Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
196.3 0.7
196.86 0.0
204.03 0.5

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6a2D-NeuGc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6a2D-NeuGc,p/#ycleavage$MONO,Und,-H,0,redEnd
204.6 0.0
212.21 1.4
212.77 0.0
213.3 0.0
235.93 0.7
236.48 0.0
288.11 0.8
288.69 0.0
290.99 0.8
291.54 0.0
305.54 0.6
306.13 30.0

Annotations:

B ?1D-GalNAc,p/#bcleavage--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd
306.96 0.7
307.53 0.0
324.01 0.8

Annotations:

C ?1D-GalNAc,p/#ccleavage--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd
324.56 0.0
366.28 0.7

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6a2D-NeuGc,p/#zcleavage$MONO,Und,-H,0,redEnd
366.84 0.0
384.16 4.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6a2D-NeuGc,p/#ycleavage$MONO,Und,-H,0,redEnd
384.77 0.0
385.19 0.7
385.77 0.0
399.17 0.7
399.71 0.0
433.87 0.4
434.44 0.0
454.22 3.7

Annotations:

^{0,2}X_{NeuGc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p)--6a2D-NeuGc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
454.86 0.0
455.4 0.0
467.36 1.4
467.94 0.0
477.22 1.4
477.82 0.0
486.04 0.7
486.6 0.0
493.13 0.5
493.65 0.9
494.2 0.0
508.32 0.5
508.87 0.0
510.19 0.8
510.78 0.0
511.23 3.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6a2D-NeuGc,p$MONO,Und,-H,0,redEnd
511.88 0.0
513.33 3.5
513.92 0.0
514.47 0.0
530.09 0.6
530.43 1.4
531.02 0.0
537.09 1.1
537.64 0.0
567.94 0.5
568.52 0.0
572.89 0.5
573.44 0.0
579.43 0.5
579.99 0.0
596.34 1.6
597.25 23.2
598.05 2.3
598.56 1.7
599.13 0.0
599.65 0.0
629.94 0.4
630.53 0.5
631.1 0.0
636.51 0.5
637.05 0.0
641.35 1.1
641.91 0.0
643.42 0.6
643.97 0.0
646.71 2.5
646.91 1.8
647.32 0.9
647.88 0.0
648.59 0.6
649.15 0.0
652.37 1.5
652.94 0.0
655.05 0.5
655.61 0.0
659.22 0.3
659.78 0.0
660.75 1.4
661.3 0.0
664.85 0.8
665.41 0.0
666.12 0.6
666.69 0.0
883.83 0.7
884.38 0.0
1065.12 0.5
1065.69 0.0
1213.7 1.1
1214.27 0.0

There are 24 similar spectra:

Id Structure Score

1.00

3115

0.97

7985

0.95

6709

0.94

7622

0.92

7402

0.86

7431

0.86

5702

0.84

6799

0.83

3494

0.81

7143

0.79

0.78

6710

0.77

4205

0.77

5703

0.76

3748

0.75

7623

0.75

3495

0.75

4080

0.74

4261

0.73

5249

0.73

7986

0.65

7142

0.64

5199

0.55

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 690.25
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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