Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
306.91 0.3

Annotations:

B ?1D-GalNAc,p/#bcleavage--3b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
325.09 0.5

Annotations:

C ?1D-GalNAc,p/#ccleavage--3b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
361.86 0.6
367.04 3.1

Annotations:

^{2,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_2_4--3b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
368.07 0.4
389.12 12.1

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
390.22 1.0
405.55 0.5
407.16 4.9

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
408.17 0.3
409.14 4.2
410.24 0.6
426.99 0.3

Annotations:

^{0,2}A_{GlcNAc} b1D-GlcNAc,p/#acleavage_0_2--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
450.82 0.4
464.31 0.5
491.17 0.4
508.86 0.4

Annotations:

^{2,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
510.11 4.0

Annotations:

B ?1D-GalNAc,p/#bcleavage--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
510.5 0.5
511.18 0.5
512.29 0.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1L-Fuc,p)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
513.21 0.8
530.06 0.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1L-Fuc,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
530.28 0.5
550.72 0.5
551.23 3.2

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd
552.27 1.0
569.13 0.4

Annotations:

YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd YZ redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd
570.16 2.5

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
655.16 5.1
656.01 0.3
656.29 0.4
673.27 10.0

Annotations:

^{2,4}X_{GlcNAc} redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1L-Fuc,p)--6b1D-GlcNAc,p/#xcleavage_2_4$MONO,Und,-H,0,redEnd ^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_2_4--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
674.26 2.2
674.58 0.3
677.22 0.6
677.47 0.5
678.35 0.8
679.06 1.2
691.4 0.4
692.36 0.3
692.76 0.4
697.46 0.8
715.2 91.8

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
716.25 25.7
732.74 0.4
733.29 2.8

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
734.04 0.6
739.84 0.6
751.96 0.5
817.29 0.5
824.24 0.4
824.58 0.4
831.09 0.3
846.01 0.4
849.25 0.6
859.43 0.4
860.79 0.4
865.54 0.3
868.18 0.7
869.19 1.6
870.27 0.7
876.09 0.6
877.04 0.9
877.44 1.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p/#zcleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1L-Fuc,p/#zcleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
877.97 0.5
886.82 0.5
887.57 1.0
895.0 0.7
895.36 0.9

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1L-Fuc,p)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1L-Fuc,p/#ycleavage)--6b1D-GlcNAc,p--4b1D-Gal,p--??1L-Fuc,p$MONO,Und,-H,0,redEnd
896.2 1.6
896.41 0.6
897.12 0.4
897.42 0.6
906.95 0.5
933.22 0.6
939.49 0.6
942.36 0.3
950.15 0.4
960.27 0.4
962.2 1.0
977.35 0.4
981.36 6.6
982.36 0.8
997.12 0.9
997.39 1.1
998.8 0.3
999.32 10.1
1000.26 4.4
1000.61 2.3
1004.0 0.5
1005.42 0.7
1006.33 0.7
1010.63 0.4
1042.33 3.6
1349.25 0.4
1415.85 0.3
1495.47 0.3
1570.68 0.4
1719.36 0.4

There are 15 similar spectra:

Id Structure Score

5597

0.99

4251

0.99

5243

0.99

7657

0.99

7673

0.99

5806

0.98

5524

0.97

7656

0.97

7672

0.97

7904

0.93

7241

0.89

4270

0.66

3896

0.64

7240

0.56

5595

0.51

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1040.41
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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