Structure

    redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--?a1L-Fuc,p@270s)--6b1D-GlcNAc,p--?b1D-Gal,p--?a1L-Fuc,p@270s$MONO,Und,-H,0,redEnd

Integrated O-glycomic and proteomic signatures of spontaneous and butyrate-stimulated colorectal cancer cell line differentiation

GlyTouCan Accession Number: Loading...

Peak Intensity
530.14 412.0

Annotations:

Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--?a1L-Fuc,p@270s)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
659.03 352.0

Annotations:

^{0,3}X_{Fuc}Y redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--?a1L-Fuc,p/#xcleavage_0_3@270s)--6b1D-GlcNAc,p--?b1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd Y^{0,3}X_{Fuc} redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p--?b1D-Gal,p--?a1L-Fuc,p/#xcleavage_0_3@270s$MONO,Und,-H,0,redEnd
715.35 421.0

Annotations:

Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--?a1L-Fuc,p@270s)--6b1D-GlcNAc,p--?b1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd Z redEnd--?a1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p--?b1D-Gal,p--?a1L-Fuc,p@270s$MONO,Und,-H,0,redEnd
981.4 276.0

Annotations:

^{1,3}X_{Fuc} redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--?a1L-Fuc,p/#xcleavage_1_3@270s)--6b1D-GlcNAc,p--?b1D-Gal,p--?a1L-Fuc,p@270s$MONO,Und,-H,0,redEnd ^{2,4}X_{Fuc} redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--?a1L-Fuc,p/#xcleavage_2_4@270s)--6b1D-GlcNAc,p--?b1D-Gal,p--?a1L-Fuc,p@270s$MONO,Und,-H,0,redEnd ^{1,3}X_{Fuc} redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--?a1L-Fuc,p@270s)--6b1D-GlcNAc,p--?b1D-Gal,p--?a1L-Fuc,p/#xcleavage_1_3@270s$MONO,Und,-H,0,redEnd ^{2,4}X_{Fuc} redEnd--?a1D-GalNAc,p(--3b1D-Gal,p--?a1L-Fuc,p@270s)--6b1D-GlcNAc,p--?b1D-Gal,p--?a1L-Fuc,p/#xcleavage_2_4@270s$MONO,Und,-H,0,redEnd

There are 17 similar spectra:

Id Structure Score

3895

0.70

7241

0.64

7656

0.61

7672

0.61

0.61

4270

0.60

3896

0.58

5806

0.57

7657

0.57

7673

0.57

0.57

5597

0.56

4251

0.56

5243

0.56

4878

0.56

0.56

5524

0.55

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1040.41
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

N/A

HPLC

Column Hypercarb

Method

  • 73min gradient with 0,6ul/min run rate
  • 10mM ammonium bicarbonate
  • 60% ACN, 10mM ammonium bicarbonate

Mass Spec

Bruker Daltonik amaZon Speed ETD ETD

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