Structure

    redEnd--??1D-GalNAc,p((--3b1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p)--??1S$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
302.04 0.3

Annotations:

YY redEnd--??1D-GalNAc,p((--3b1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage)--??1S$MONO,Und,-H,0,redEnd
302.61 0.0
303.13 0.0
307.87 0.3

Annotations:

C ?1D-GalNAc,p/#ccleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
308.44 0.0
308.96 0.0
370.04 2.7
370.74 0.0
371.26 0.0
371.81 0.0
462.03 0.4
462.62 0.0
464.06 107.8

Annotations:

YY redEnd--??1D-GalNAc,p((--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage)--??1S$MONO,Und,-H,0,redEnd
465.0 0.7
465.56 0.0
466.09 0.4
466.66 0.0
467.18 0.0
471.21 0.2
471.77 0.0
472.29 0.0
514.05 0.5
514.61 0.0
515.13 0.0
515.69 0.0
592.93 0.2

Annotations:

Y redEnd--??1D-GalNAc,p((--3b1D-Gal,p/#ycleavage)--6a2D-NeuAc,p)--??1S$MONO,Und,-H,0,redEnd
593.52 0.0
594.04 0.0
621.1 0.1
621.65 0.0
622.19 0.0
633.33 0.3
633.88 0.0
634.44 0.0
641.05 0.3
641.61 0.0
642.12 0.0
661.1 0.1
661.65 0.0
662.19 0.0
664.14 0.1
664.69 0.0
665.22 0.0
674.29 0.1
675.23 5.9

Annotations:

Y redEnd--??1D-GalNAc,p((--3b1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p/#ycleavage)--??1S/#lcleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p((--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6a2D-NeuAc,p)--??1S/#lcleavage$MONO,Und,-H,0,redEnd
675.96 0.3
676.52 0.0
677.03 0.0
695.22 0.3

Annotations:

^{2,4}X_{Gal} redEnd--??1D-GalNAc,p((--3b1D-Gal,p/#xcleavage_2_4)--6a2D-NeuAc,p)--??1S$MONO,Und,-H,0,redEnd
695.83 0.0
696.36 0.0
704.46 0.2
705.02 0.0
705.54 0.0
711.29 3.4
711.91 0.0
712.46 0.0
712.98 0.0
752.95 0.4
753.7 0.2
755.09 95.5

Annotations:

Y redEnd--??1D-GalNAc,p((--3b1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p/#ycleavage)--??1S$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p((--3b1D-Gal,p--3a2D-NeuAc,p/#ycleavage)--6a2D-NeuAc,p)--??1S$MONO,Und,-H,0,redEnd
756.1 0.2
756.63 0.0
757.23 0.4
757.78 0.0
758.32 0.0
758.86 0.0
802.07 0.2
802.62 0.0
803.19 0.0
820.66 0.2
821.21 0.0
821.77 0.0
872.83 0.2
873.38 0.0
873.94 0.0
939.79 0.3
940.36 0.0
940.87 0.0
947.19 0.1
947.77 0.0
948.28 0.0
958.38 0.2
958.94 0.0
959.47 0.0
966.11 2.7

Annotations:

redEnd--??1D-GalNAc,p((--3b1D-Gal,p--3a2D-NeuAc,p)--6a2D-NeuAc,p)--??1S/#lcleavage$MONO,Und,-H,0,redEnd
966.49 0.4
967.05 0.0
967.61 0.0
968.12 0.0
985.97 0.3
986.53 0.0
987.05 0.0
992.16 0.3
992.7 0.0
993.27 0.0
993.78 0.0
1002.24 0.3
1002.79 0.0
1003.35 0.0

There are 2 similar spectra:

Id Structure Score

6596

0.88

6595

0.69

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1045.31
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

Report errors in this entry

UniCarb-DR Creative Commons License

Supported by SIB ExPASy  |  JST / NBDCDICP