Structure

    redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
308.07 1.0

Annotations:

C ?1D-GalNAc,p/#ccleavage--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
347.33 0.6

Annotations:

^{0,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p--??1D-Gal,p/#zcleavage$MONO,Und,-H,0,redEnd
364.01 3.1

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd B a1D-GalNAc,p/#bcleavage--??1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
364.37 1.3
365.1 1.2

Annotations:

^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage$MONO,Und,-H,0,redEnd
389.16 1.7

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
407.21 3.7

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
424.94 0.7
425.26 2.2

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
451.34 1.3
485.43 0.7
495.05 0.8

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
496.25 0.8
503.46 0.5
509.05 0.6

Annotations:

^{0,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
513.17 0.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
525.49 0.7
527.15 5.8

Annotations:

^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
527.53 1.2
567.28 13.9

Annotations:

B ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
568.23 1.4
569.2 7.8

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
570.36 1.0
587.19 14.7

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
587.61 2.3

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
588.31 2.5
639.02 0.9

Annotations:

Z^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#zcleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
654.41 0.7
657.37 1.1

Annotations:

Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
665.45 0.5
669.0 0.5
669.37 1.8
670.13 0.6
670.37 0.9
688.33 1.1
694.96 0.8
695.27 1.1
698.39 0.9

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
712.3 1.8
712.49 1.3
715.1 0.6
716.36 3.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
717.38 1.8
730.3 10.3

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
731.13 1.2
731.52 0.8
744.15 0.6
748.29 1.0
748.5 0.5
754.04 0.9
754.41 2.5
772.34 30.9

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
773.11 2.5
773.41 3.1
775.08 0.5
789.64 0.9
790.32 93.8

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
791.36 28.8
800.55 1.4
801.53 1.9
818.31 5.9
819.51 1.3
832.21 1.8
841.59 0.5
842.35 9.3
843.36 3.4
854.86 0.5
859.48 2.1
860.35 47.6

Annotations:

^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
861.41 11.6
878.36 20.7

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p--??1D-Gal,p--??1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
879.35 9.1
880.38 0.7
883.31 2.4
884.43 0.8
895.59 0.7
901.35 0.6
913.4 2.8
938.61 0.5
943.09 1.2
943.41 0.5
944.26 0.7
955.35 1.3
962.45 0.8
973.43 4.3
974.38 0.6
979.26 2.4
980.37 0.6
986.29 0.8
1002.28 0.6
1003.55 19.6
1004.48 8.2
1020.21 0.9
1021.39 273.5
1022.37 100.4
1039.68 0.9
1040.22 0.7
1045.27 3.5
1045.58 3.5
1046.42 0.8

There are 3 similar spectra:

Id Structure Score

5742

0.85

4884

0.84

4885

0.73

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1080.41
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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