Structure

    redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6b1D-GlcNAc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
309.12 0.6
382.33 0.4

Annotations:

CY ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
387.17 2.4

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
389.08 0.4
405.12 3.0

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
407.27 1.0
477.08 2.0
477.41 1.2
477.88 0.7
478.27 0.5
495.26 1.2

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
513.67 0.4

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
519.82 0.5
527.3 1.6

Annotations:

^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
542.23 0.4
549.38 0.5
550.15 1.0

Annotations:

^{0,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
551.13 1.2

Annotations:

ZZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#zcleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
567.22 3.8

Annotations:

B ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
568.2 0.9

Annotations:

^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
569.2 2.4

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#zcleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
570.29 1.0
588.21 0.5
610.27 1.0

Annotations:

YZ redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd ZY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
628.21 0.9

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
640.11 0.5
653.21 1.2
672.45 0.5
710.5 0.7
712.15 0.7
713.28 0.5
723.88 0.6
730.28 9.8

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
731.24 2.6
742.26 0.4
754.3 0.7
772.32 23.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
773.48 2.3
779.39 0.8
782.36 0.5
790.26 18.5

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
791.26 2.8
792.16 1.0
798.31 0.4
800.13 0.6
832.63 0.6
841.14 0.4
842.32 14.9
843.45 2.9
859.42 3.8

Annotations:

^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
860.41 15.5

Annotations:

^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
861.42 2.9
865.23 0.5
865.75 0.4
878.41 2.0

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
879.36 2.8
879.6 2.0
880.09 0.6
883.17 2.4
884.38 0.8
901.27 1.8

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
901.54 0.8
902.41 2.6
913.19 0.7
913.5 0.6
918.24 1.4
919.1 0.9
919.48 1.8

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
919.73 0.5
920.55 2.7
921.31 1.4
921.59 0.7
925.5 0.8
944.2 0.8
944.44 0.5
961.11 0.9
961.51 1.5
962.46 0.5
973.48 0.8
978.31 0.5
980.07 0.6
985.24 2.7
985.67 0.6
986.42 0.6
990.25 0.5
1003.39 48.0
1004.41 18.4
1019.32 0.8
1019.74 0.5
1020.25 1.3
1021.39 67.6
1022.39 23.9
1032.04 0.6
1037.2 0.8
1039.68 0.5
1043.91 0.5
1045.3 10.1
1045.64 5.3
1046.37 2.6
1738.06 0.5

There are 3 similar spectra:

Id Structure Score

4885

0.88

4883

0.84

5742

0.69

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1080.41
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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