Structure

    redEnd--??1D-GalNAc,p(--3?1HexNAc,p(--3?1D-Gal,p)--??1HexNAc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
312.27 0.3
332.11 0.3
346.11 0.3

Annotations:

BZ ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
369.45 0.2
405.06 0.8

Annotations:

BY ?1D-GalNAc,p/#bcleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd CZ ?1D-GalNAc,p/#ccleavage--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
405.31 0.3
406.18 0.4
407.14 0.3
429.16 0.3
477.41 0.5
527.32 0.5

Annotations:

^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#xcleavage_0_4--3?1D-Gal,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
549.84 0.3

Annotations:

^{0,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p(--3?1D-Gal,p/#zcleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd ^{2,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
568.2 0.5

Annotations:

^{2,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd ^{0,4}X_{GalNAc}Y redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
570.44 0.6
578.56 0.2
587.03 0.2

Annotations:

YY redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
587.48 0.2
602.26 0.4
631.15 0.2
657.18 0.2

Annotations:

Y^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd
713.23 0.3
714.06 0.4
715.73 0.3
722.48 0.3
722.92 0.4
729.73 0.4
730.31 2.3

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_0_4--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p$MONO,Und,-H,0,redEnd
731.47 0.2
748.3 0.3
749.48 0.4
770.39 0.2
772.27 2.8

Annotations:

Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p)--6a2D-NeuAc,p/#zcleavage$MONO,Und,-H,0,redEnd
772.52 1.7
773.28 0.6
781.68 0.3
790.28 3.4

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p)--6a2D-NeuAc,p/#ycleavage$MONO,Und,-H,0,redEnd
791.22 0.4
800.4 0.8
803.63 0.6
816.21 0.5
817.93 0.3

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#xcleavage_0_4--3?1D-Gal,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
824.7 0.9
825.25 0.4
835.61 0.3
837.93 0.4
841.33 0.4
842.4 1.6
843.4 0.4
849.12 0.2
858.23 0.3
859.2 0.2

Annotations:

^{2,4}X_{GalNAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p/#xcleavage_2_4--6?1HexNAc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
860.47 1.9

Annotations:

^{0,2}X_{NeuAc} redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p)--6a2D-NeuAc,p/#xcleavage_0_2$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#zcleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
861.57 0.6
875.44 0.3
878.27 1.1

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p)--6?1HexNAc,p/#ycleavage)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
878.59 0.3
879.41 0.8
885.51 0.5
896.86 0.6
904.43 0.2
905.41 3.1
905.75 0.3
906.31 0.9
906.58 0.3
907.02 0.4
919.34 0.2

Annotations:

Y redEnd--??1D-GalNAc,p(--3a1D-GalNAc,p(--3?1D-Gal,p/#ycleavage)--6?1HexNAc,p)--6a2D-NeuAc,p$MONO,Und,-H,0,redEnd
920.42 1.6
921.1 0.3
943.48 0.3
944.52 0.5
960.53 0.2
961.46 0.9
962.41 0.2
973.81 0.6
982.33 0.4
985.39 0.6
988.98 0.3
997.79 0.8
998.32 0.4
998.89 0.3
999.25 0.4
999.89 0.4
1002.42 0.3
1003.4 7.2
1004.35 1.2
1007.91 0.4
1018.32 0.5
1018.63 0.2
1020.54 0.8
1021.36 8.8
1021.69 3.4
1022.46 2.2
1029.37 0.3
1036.05 0.2
1039.62 0.2
1040.51 0.3
1045.45 1.4
1046.36 0.3
1050.79 0.3
1166.64 0.4

There are 6 similar spectra:

Id Structure Score

1.00

4884

0.88

0.88

4883

0.73

0.73

5742

0.66

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 1080.41
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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