Structure

    redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd

Effects of size and geographical origin on Atlantic salmon, Salmo salar, mucin O-glycan repertoire

PubMed Entry

GlyTouCan Accession Number: Loading...

Peak Intensity
246.08 0.7
246.63 0.0
250.82 1.8
251.37 0.0
251.94 0.0
261.65 1.1
262.33 1.5

Annotations:

^{0,4}A_{GalNAc} ?1D-GalNAc,p/#acleavage_0_4--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
262.9 0.0
275.63 1.1
276.19 0.0
276.71 0.0
305.76 1.5

Annotations:

^{0,4}X_{GalNAc}Z redEnd--??1D-GalNAc,p/#xcleavage_0_4--3b1D-Gal,p--??1HexNAc,p/#zcleavage$MONO,Und,-H,0,redEnd
306.16 0.7
306.71 0.0
317.31 2.3
317.88 0.0
318.44 0.0
347.26 1.0
347.8 0.0
384.29 2.0

Annotations:

YY redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd
384.97 0.0
389.06 2.0
389.61 0.0
390.14 0.0
404.79 1.8
405.14 8.4
405.78 0.0
406.33 0.0
407.26 0.7

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#zcleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
407.82 0.0
425.1 8.8

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p/#ycleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
426.12 0.9
426.69 0.0
428.88 0.6
429.44 0.0
440.17 0.6
440.71 0.0
484.74 0.5
485.29 3.1
486.03 0.0
507.39 1.2
507.94 0.0
508.47 0.0
510.15 1.2
510.7 0.0
513.48 1.3
514.03 0.0
519.09 1.3
519.63 0.0
521.24 1.2
521.79 0.0
527.31 1.8

Annotations:

^{0,4}X_{GalNAc} redEnd--??1D-GalNAc,p/#xcleavage_0_4--3b1D-Gal,p--??1HexNAc,p$MONO,Und,-H,0,redEnd
527.87 0.0
532.23 0.7
532.78 0.0
546.13 1.2
546.69 0.0
547.21 0.0
548.59 1.3
549.13 0.0
566.91 4.4
567.13 6.5
567.79 0.0
568.13 3.8
568.69 0.0
569.07 1.6

Annotations:

Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p)--6b1D-GlcNAc,p/#zcleavage$MONO,Und,-H,0,redEnd Z redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#zcleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
569.66 0.0
577.31 0.8
577.87 0.0
587.19 2.3

Annotations:

Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p)--6b1D-GlcNAc,p/#ycleavage$MONO,Und,-H,0,redEnd Y redEnd--??1D-GalNAc,p(--3b1D-Gal,p--??1HexNAc,p/#ycleavage)--6b1D-GlcNAc,p$MONO,Und,-H,0,redEnd
587.79 0.0
640.2 1.1
640.77 0.0
641.23 1.3
641.78 0.0
642.31 0.0
643.12 0.6
643.69 0.0
670.13 1.0
670.69 0.0
681.95 0.9
682.52 0.0
687.83 0.7
688.16 2.2
688.71 0.0
689.27 0.0
693.16 0.6
693.71 0.0
718.12 0.8
718.69 0.0
730.26 51.5
731.27 3.9
731.62 1.8
732.19 0.0
732.72 0.0
742.09 1.0
742.64 0.0
748.34 9.1
748.94 0.0
749.47 0.0

There are 12 similar spectra:

Id Structure Score

5718

1.00

1.00

4851

0.81

0.81

5431

0.72

3756

0.65

5715

0.64

4806

0.54

0.54

5717

0.52

7406

0.50

7435

0.50

Structure Format

SNFG Oxford Text

Structure details

Reducing Mass: 789.32
(Calculated Monoisotopic)

Reducing End: Reduced

Persubstitution: Underivatised

Biological Context

Taxonomy - Salmo Salar
Tissue - Mucus

HPLC

Column

Method

  • 40 min gradient with 10 ul/min run rate
  • 10 mM (NH4)HCO3 in water
  • 10 mM (NH4)HCO3 in 80% acetontirile

Mass Spec

Thermo Fisher LTQ Linear Ion Trap ESI

MIRAGE Structural data

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